Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522415 |
| gene name | LOC106575491 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 17766219 ~ 17766694 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| glutamate receptor ionotropic, NMDA 3B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743047 | True | 476 | TUCP | 0.58 | 1 | 17766219 | 17766694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519433 | NA | coding | upstream | 49300 | 17715037 ~ 17716919 (+) |
| LOC118936563 | LOC106591654 | coding | upstream | 51183 | 17705378 ~ 17715036 (+) |
| LOC110527382 | LOC106575451 | coding | upstream | 125429 | 17638633 ~ 17640790 (+) |
| LOC110527377 | LOC100136320 | coding | upstream | 129635 | 17631679 ~ 17636584 (+) |
| LOC110527374 | LOC106592210 | coding | upstream | 135087 | 17623786 ~ 17631132 (+) |
| LOC110528768 | LOC106591671 | coding | downstream | 64756 | 17831450 ~ 17839017 (+) |
| LOC110527394 | LOC106591034 | coding | downstream | 276039 | 18042733 ~ 18053825 (+) |
| LOC110528909 | LOC106595470 | coding | downstream | 291008 | 18057702 ~ 18075184 (+) |
| LOC110495693 | LOC105019803 | coding | downstream | 309506 | 18076200 ~ 18093990 (+) |
| atr | atr | coding | downstream | 330869 | 18097563 ~ 18129363 (+) |
| G1522414 | NA | non-coding | upstream | 63 | 17765914 ~ 17766156 (+) |
| G1522413 | NA | non-coding | upstream | 1752 | 17760733 ~ 17764467 (+) |
| G1522412 | NA | non-coding | upstream | 12789 | 17751707 ~ 17753430 (+) |
| G1522410 | LOC100194703 | non-coding | upstream | 18462 | 17747445 ~ 17747757 (+) |
| G1522401 | LOC106591655 | non-coding | upstream | 33149 | 17724115 ~ 17733070 (+) |
| G1522416 | NA | non-coding | downstream | 4685 | 17771379 ~ 17771651 (+) |
| G1522426 | NA | non-coding | downstream | 43106 | 17809800 ~ 17810012 (+) |
| G1522428 | LOC106591757 | non-coding | downstream | 46942 | 17813636 ~ 17814599 (+) |
| G1522430 | NA | non-coding | downstream | 48606 | 17815300 ~ 17815520 (+) |
| G1522433 | NA | non-coding | downstream | 53093 | 17819787 ~ 17819993 (+) |
| LOC110495674 | LOC106575504 | other | upstream | 1297796 | 16454118 ~ 16468453 (+) |
| G1520748 | NA | other | upstream | 1827401 | 15938230 ~ 15938818 (+) |
| G1520742 | NA | other | upstream | 1843320 | 15919157 ~ 15922899 (+) |
| G1520649 | NA | other | upstream | 1950214 | 15756493 ~ 15816005 (+) |
| G1522437 | LOC106575479 | other | downstream | 72975 | 17839669 ~ 17844014 (+) |
| G1522438 | NA | other | downstream | 89447 | 17856141 ~ 17860614 (+) |
| G1522684 | NA | other | downstream | 612393 | 18379087 ~ 18380258 (+) |
| LOC110495728 | LOC106574584 | other | downstream | 827640 | 18594324 ~ 18595682 (+) |
| LOC118936474 | LOC106574488 | other | downstream | 949168 | 18702289 ~ 18722091 (+) |
