Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522979 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 17852947 ~ 17853152 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107662719 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743764 | True | 206 | lncRNA | 0.38 | 1 | 17852947 | 17853152 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510546 | LOC106575482 | coding | downstream | 37944 | 17719504 ~ 17815003 (-) |
| LOC118941106 | LOC106575483 | coding | downstream | 150120 | 17685551 ~ 17702827 (-) |
| LOC110527371 | LOC106575485 | coding | downstream | 168353 | 17675207 ~ 17684594 (-) |
| LOC110528763 | LOC106575486 | coding | downstream | 181017 | 17640874 ~ 17671930 (-) |
| LOC110527378 | LOC106575453 | coding | downstream | 219383 | 17630872 ~ 17633564 (-) |
| LOC100135945 | LOC106575464 | coding | upstream | 66933 | 17920085 ~ 17938169 (-) |
| LOC110528772 | LOC105019808 | coding | upstream | 86785 | 17939937 ~ 18012067 (-) |
| trnal-cag-10 | NA | coding | upstream | 169319 | 18022401 ~ 18022696 (-) |
| trnal-cag-11 | NA | coding | upstream | 170174 | 18023326 ~ 18023408 (-) |
| trnal-cag-12 | NA | coding | upstream | 170746 | 18023898 ~ 18023980 (-) |
| G1522976 | NA | non-coding | downstream | 3173 | 17849465 ~ 17849774 (-) |
| G1522947 | NA | non-coding | downstream | 11406 | 17839568 ~ 17841541 (-) |
| G1522974 | NA | non-coding | downstream | 13437 | 17839099 ~ 17839510 (-) |
| G1522962 | NA | non-coding | downstream | 40376 | 17812358 ~ 17812571 (-) |
| G1522961 | NA | non-coding | downstream | 41771 | 17810972 ~ 17811176 (-) |
| G1522980 | NA | non-coding | upstream | 415 | 17853567 ~ 17853769 (-) |
| G1522981 | NA | non-coding | upstream | 1771 | 17854923 ~ 17855232 (-) |
| G1522991 | NA | non-coding | upstream | 21456 | 17874608 ~ 17874824 (-) |
| G1522993 | NA | non-coding | upstream | 26865 | 17880017 ~ 17880441 (-) |
| G1522995 | NA | non-coding | upstream | 29825 | 17882977 ~ 17886755 (-) |
| G1522794 | NA | other | downstream | 402769 | 17441659 ~ 17450178 (-) |
| LOC118941063 | LOC106574632 | other | downstream | 841569 | 17009382 ~ 17011759 (-) |
| LOC118941107 | NA | other | upstream | 198828 | 18051980 ~ 18054354 (-) |
| G1523149 | fndc3b | other | upstream | 578941 | 18432093 ~ 18436052 (-) |
| ghs-r | ghsr | other | upstream | 592435 | 18445083 ~ 18447303 (-) |
| G1523234 | NA | other | upstream | 687993 | 18541145 ~ 18541711 (-) |
| G1523241 | NA | other | upstream | 708754 | 18561906 ~ 18567247 (-) |
