Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 18022058 ~ 18022281 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743240 | True | 224 | lncRNA | 0.38 | 1 | 18022058 | 18022281 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528768 | LOC106591671 | coding | upstream | 183041 | 17831450 ~ 17839017 (+) |
| LOC110519433 | NA | coding | upstream | 305139 | 17715037 ~ 17716919 (+) |
| LOC118936563 | LOC106591654 | coding | upstream | 307022 | 17705378 ~ 17715036 (+) |
| LOC110527382 | LOC106575451 | coding | upstream | 381268 | 17638633 ~ 17640790 (+) |
| LOC110527377 | LOC100136320 | coding | upstream | 385474 | 17631679 ~ 17636584 (+) |
| LOC110527394 | LOC106591034 | coding | downstream | 20452 | 18042733 ~ 18053825 (+) |
| LOC110528909 | LOC106595470 | coding | downstream | 35421 | 18057702 ~ 18075184 (+) |
| LOC110495693 | LOC105019803 | coding | downstream | 53919 | 18076200 ~ 18093990 (+) |
| atr | atr | coding | downstream | 75282 | 18097563 ~ 18129363 (+) |
| LOC110495694 | LOC106575448 | coding | downstream | 108825 | 18129571 ~ 18136939 (+) |
| G1522487 | NA | non-coding | upstream | 81347 | 17938478 ~ 17940711 (+) |
| G1522466 | LOC100534484 | non-coding | upstream | 88777 | 17921980 ~ 17933281 (+) |
| G1522498 | LOC106575464 | non-coding | upstream | 100965 | 17920084 ~ 17921093 (+) |
| G1522477 | NA | non-coding | upstream | 132850 | 17885675 ~ 17889208 (+) |
| G1522473 | NA | non-coding | upstream | 141249 | 17880462 ~ 17880809 (+) |
| G1522600 | NA | non-coding | downstream | 194359 | 18216640 ~ 18217776 (+) |
| G1522563 | NA | non-coding | downstream | 202501 | 18224782 ~ 18231387 (+) |
| G1522601 | LOC106575419 | non-coding | downstream | 209609 | 18231890 ~ 18236181 (+) |
| G1522604 | NA | non-coding | downstream | 217628 | 18239909 ~ 18241184 (+) |
| G1522438 | NA | other | upstream | 161444 | 17856141 ~ 17860614 (+) |
| G1522437 | LOC106575479 | other | upstream | 178044 | 17839669 ~ 17844014 (+) |
| G1522415 | LOC106575491 | other | upstream | 255364 | 17766219 ~ 17766694 (+) |
| LOC110527374 | LOC106592210 | other | upstream | 394414 | 17623786 ~ 17631132 (+) |
| LOC110495674 | LOC106575504 | other | upstream | 1553635 | 16454118 ~ 16468453 (+) |
| G1522684 | NA | other | downstream | 356806 | 18379087 ~ 18380258 (+) |
| LOC110495728 | LOC106574584 | other | downstream | 572053 | 18594324 ~ 18595682 (+) |
| LOC118936474 | LOC106574488 | other | downstream | 693581 | 18702289 ~ 18722091 (+) |
| LOC110495746 | LOC106574508 | other | downstream | 937163 | 18959384 ~ 18978475 (+) |
| G1523506 | NA | other | downstream | 999724 | 19022005 ~ 19022395 (+) |
