G1523045


Basic Information

Item Value
gene id G1523045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18084524 ~ 18087754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743843
cctctaggttacctctctaacctctaggttacctCTCTAACCTCCAGATTACCTCTCTAACCTCAAGGTTACCGATATCCCTCTCTAATCTCCAGATTACCTATCTAACCTCAAGGttacctatatccctctctaatCTCTAGGTTAACTCTCTAACCTCAAGGttatatatctccctctctaacctctagatTACCTATCTAACCTCAAGGttacctatatccctctctaacctctaggtcaCCTATCTATCCTCTAGGttacctatatccctctctaacctctaggttaaCTCTCTAACCTCAAGGTTACCTAtctaacctctaggttacctatctaacctctaggttacctatctccctctctaacctctaggttacTTCTCCAACCTCTAGGttacctctctaacctctaggttacctCTCTAACCTCCAGGTTTCTCCCTAACCTCCAGGTTTCTCCCTAACCTCTAGGttatatatctccctctctaacctctaggttacctCTCTAACCTCGAGgttatctatctccctctctaacctctaggttatCCCTCTAATCTCTAGGTTACCTCTCTAACCTTTAGGTTAACTCTCTAACCTCCAGGTTAACTCTCTAACCTCCAGGTtaactatctccctctctaacctctaggttacctctctaacctctaggttacctCCCTAACCTCGAGGTTAACTCTCTAACCTCTGTGGGTGTCTGTAGgtatgtgtgtgtgagtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtaactaaCCGATCCTGTTGAAAGCCTCCCGGAGCTCCTCCAGGTCCTCTCGTGAAATCTGGGTCACCTTTTTCGCCATACTGGACAGTCTATCTAGATTACCt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743843 True 909 lncRNA 0.45 3 18084524 18087754

Neighbor

gene id symbol gene type direction distance location
LOC118941107 NA coding downstream 30170 18051980 ~ 18054354 (-)
trnal-cag-26 NA coding downstream 43025 18041417 ~ 18041499 (-)
trnal-cag-25 NA coding downstream 43871 18040571 ~ 18040653 (-)
trnal-cag-24 NA coding downstream 44639 18039803 ~ 18039885 (-)
trnal-cag-23 NA coding downstream 45211 18039231 ~ 18039313 (-)
LOC110495700 LOC106594337 coding upstream 73201 18160955 ~ 18167363 (-)
LOC110495699 LOC106574468 coding upstream 137028 18224782 ~ 18231424 (-)
LOC110497068 LOC106574469 coding upstream 144135 18231889 ~ 18237893 (-)
ghs-r ghsr coding upstream 357329 18445083 ~ 18447303 (-)
LOC110497072 LOC106574477 coding upstream 412072 18499826 ~ 18513863 (-)
trnal-cag-10 NA non-coding downstream 61828 18022401 ~ 18022696 (-)
G1522995 NA non-coding downstream 197769 17882977 ~ 17886755 (-)
G1522993 NA non-coding downstream 204083 17880017 ~ 17880441 (-)
G1522991 NA non-coding downstream 209700 17874608 ~ 17874824 (-)
G1522981 NA non-coding downstream 229292 17854923 ~ 17855232 (-)
G1523056 NA non-coding upstream 16865 18104619 ~ 18105012 (-)
G1523063 atr non-coding upstream 25717 18113471 ~ 18114182 (-)
G1523081 NA non-coding upstream 75460 18163214 ~ 18163965 (-)
G1523073 LOC106575446 non-coding upstream 113497 18201251 ~ 18202588 (-)
G1523114 NA non-coding upstream 150764 18238518 ~ 18238736 (-)
LOC110510546 LOC106575482 other downstream 339626 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 381771 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 414565 17640874 ~ 17671930 (-)
G1522794 NA other downstream 634346 17441659 ~ 17450178 (-)
G1523149 fndc3b other upstream 344339 18432093 ~ 18436052 (-)
G1523234 NA other upstream 453391 18541145 ~ 18541711 (-)
G1523241 NA other upstream 474152 18561906 ~ 18567247 (-)
G1524311 NA other upstream 661371 18749125 ~ 18749395 (-)

Expression


Co-expression Network