G1523081


Basic Information

Item Value
gene id G1523081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18163214 ~ 18163965 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743884
gtaggtgtgtgtgtctactgtctactgtctgtgtacATTGTAGAAGGTGCGTgtgcctactgtctactgtctgtgtatattgtagaaggtgtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtctactgtctgtgtacattatagaaggtgtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtctactgtctgtgtatattgtagaaggtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743884 True 421 lncRNA 0.41 2 18163214 18163965

Neighbor

gene id symbol gene type direction distance location
LOC118941107 NA coding downstream 108860 18051980 ~ 18054354 (-)
trnal-cag-26 NA coding downstream 121715 18041417 ~ 18041499 (-)
trnal-cag-25 NA coding downstream 122561 18040571 ~ 18040653 (-)
trnal-cag-24 NA coding downstream 123329 18039803 ~ 18039885 (-)
trnal-cag-23 NA coding downstream 123901 18039231 ~ 18039313 (-)
LOC110495699 LOC106574468 coding upstream 60817 18224782 ~ 18231424 (-)
LOC110497068 LOC106574469 coding upstream 67924 18231889 ~ 18237893 (-)
ghs-r ghsr coding upstream 281118 18445083 ~ 18447303 (-)
LOC110497072 LOC106574477 coding upstream 335861 18499826 ~ 18513863 (-)
LOC118941108 LOC106575244 coding upstream 431819 18595784 ~ 18603170 (-)
G1523063 atr non-coding downstream 49032 18113471 ~ 18114182 (-)
G1523056 NA non-coding downstream 58202 18104619 ~ 18105012 (-)
G1523045 NA non-coding downstream 75460 18084524 ~ 18087754 (-)
trnal-cag-10 NA non-coding downstream 140518 18022401 ~ 18022696 (-)
G1522995 NA non-coding downstream 276459 17882977 ~ 17886755 (-)
G1523073 LOC106575446 non-coding upstream 37286 18201251 ~ 18202588 (-)
G1523114 NA non-coding upstream 74553 18238518 ~ 18238736 (-)
G1523115 NA non-coding upstream 75185 18239150 ~ 18239685 (-)
G1523116 NA non-coding upstream 75956 18239921 ~ 18240135 (-)
G1523122 NA non-coding upstream 88732 18252697 ~ 18253031 (-)
LOC110510546 LOC106575482 other downstream 418316 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 460461 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 493255 17640874 ~ 17671930 (-)
G1522794 NA other downstream 713036 17441659 ~ 17450178 (-)
G1523149 fndc3b other upstream 268128 18432093 ~ 18436052 (-)
G1523234 NA other upstream 377180 18541145 ~ 18541711 (-)
G1523241 NA other upstream 397941 18561906 ~ 18567247 (-)
G1524311 NA other upstream 585160 18749125 ~ 18749395 (-)

Expression


Co-expression Network