Gene
RNA
| Item | Value |
|---|---|
| gene id | G1523073 |
| gene name | LOC106575446 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 18201251 ~ 18202588 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cohesin subunit SA-1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743871 | True | 453 | lncRNA | 0.56 | 2 | 18201251 | 18202588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495700 | LOC106594337 | coding | downstream | 33888 | 18160955 ~ 18167363 (-) |
| LOC118941107 | NA | coding | downstream | 146897 | 18051980 ~ 18054354 (-) |
| trnal-cag-26 | NA | coding | downstream | 159752 | 18041417 ~ 18041499 (-) |
| trnal-cag-25 | NA | coding | downstream | 160598 | 18040571 ~ 18040653 (-) |
| trnal-cag-24 | NA | coding | downstream | 161366 | 18039803 ~ 18039885 (-) |
| LOC110495699 | LOC106574468 | coding | upstream | 22194 | 18224782 ~ 18231424 (-) |
| LOC110497068 | LOC106574469 | coding | upstream | 29301 | 18231889 ~ 18237893 (-) |
| ghs-r | ghsr | coding | upstream | 242495 | 18445083 ~ 18447303 (-) |
| LOC110497072 | LOC106574477 | coding | upstream | 297238 | 18499826 ~ 18513863 (-) |
| LOC118941108 | LOC106575244 | coding | upstream | 393196 | 18595784 ~ 18603170 (-) |
| G1523081 | NA | non-coding | downstream | 37286 | 18163214 ~ 18163965 (-) |
| G1523063 | atr | non-coding | downstream | 87069 | 18113471 ~ 18114182 (-) |
| G1523056 | NA | non-coding | downstream | 96239 | 18104619 ~ 18105012 (-) |
| G1523045 | NA | non-coding | downstream | 113497 | 18084524 ~ 18087754 (-) |
| trnal-cag-10 | NA | non-coding | downstream | 178555 | 18022401 ~ 18022696 (-) |
| G1523114 | NA | non-coding | upstream | 35930 | 18238518 ~ 18238736 (-) |
| G1523115 | NA | non-coding | upstream | 36562 | 18239150 ~ 18239685 (-) |
| G1523116 | NA | non-coding | upstream | 37333 | 18239921 ~ 18240135 (-) |
| G1523122 | NA | non-coding | upstream | 50109 | 18252697 ~ 18253031 (-) |
| G1523102 | NA | non-coding | upstream | 50627 | 18253215 ~ 18258328 (-) |
| LOC110510546 | LOC106575482 | other | downstream | 456353 | 17719504 ~ 17815003 (-) |
| LOC118941106 | LOC106575483 | other | downstream | 498498 | 17685551 ~ 17702827 (-) |
| LOC110528763 | LOC106575486 | other | downstream | 531292 | 17640874 ~ 17671930 (-) |
| G1522794 | NA | other | downstream | 751073 | 17441659 ~ 17450178 (-) |
| G1523149 | fndc3b | other | upstream | 229505 | 18432093 ~ 18436052 (-) |
| G1523234 | NA | other | upstream | 338557 | 18541145 ~ 18541711 (-) |
| G1523241 | NA | other | upstream | 359318 | 18561906 ~ 18567247 (-) |
| G1524311 | NA | other | upstream | 546537 | 18749125 ~ 18749395 (-) |
