G1523115


Basic Information

Item Value
gene id G1523115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18239150 ~ 18239685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743931
ggggcaccggttagtcaaggtaattgaggtaatatgtacatgtaggtagagttattaaagtgactatgcatagataatgaacaaagagtagcagcagcgtaaaagaggggggagggggcaatgcaaatcATCTGGGTAGCCAATTGATTAGATGCtcaggagtcttgtggcttgggagtagaagctgtttagaagcctcttggacctagacttggcgctccggtactgcttgccatgctgtagtagagagaacagtctatgacgagggtggctggagtctttgacaattttttgggccttcctctgacaccgcctggtatagaggtcctggatggcaggaagcttggccccagtgatgtactgggccgtacgcactaccctctgtcgtgccttgcagtcggaggccgagcagttgccatactaggtagtgatgcaaccagttaggatgctctcgatggtgcagctgtaaaaccttttgaggatctgaggacccatgccaaatcttttcagtccctcttcatgactgtcttggtgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743931 True 536 lncRNA 0.50 1 18239150 18239685

Neighbor

gene id symbol gene type direction distance location
LOC110497068 LOC106574469 coding downstream 1257 18231889 ~ 18237893 (-)
LOC110495699 LOC106574468 coding downstream 7726 18224782 ~ 18231424 (-)
LOC110495700 LOC106594337 coding downstream 71787 18160955 ~ 18167363 (-)
LOC118941107 NA coding downstream 184796 18051980 ~ 18054354 (-)
trnal-cag-26 NA coding downstream 197651 18041417 ~ 18041499 (-)
ghs-r ghsr coding upstream 205398 18445083 ~ 18447303 (-)
LOC110497072 LOC106574477 coding upstream 260141 18499826 ~ 18513863 (-)
LOC118941108 LOC106575244 coding upstream 356099 18595784 ~ 18603170 (-)
LOC110495729 LOC106574585 coding upstream 364912 18604597 ~ 18617046 (-)
LOC110497079 LOC106575437 coding upstream 389406 18629091 ~ 18643487 (-)
G1523114 NA non-coding downstream 414 18238518 ~ 18238736 (-)
G1523073 LOC106575446 non-coding downstream 36562 18201251 ~ 18202588 (-)
G1523081 NA non-coding downstream 75185 18163214 ~ 18163965 (-)
G1523063 atr non-coding downstream 124968 18113471 ~ 18114182 (-)
G1523056 NA non-coding downstream 134138 18104619 ~ 18105012 (-)
G1523116 NA non-coding upstream 236 18239921 ~ 18240135 (-)
G1523122 NA non-coding upstream 13012 18252697 ~ 18253031 (-)
G1523102 NA non-coding upstream 13530 18253215 ~ 18258328 (-)
G1523137 NA non-coding upstream 56794 18296479 ~ 18297982 (-)
G1523143 NA non-coding upstream 62817 18302502 ~ 18302840 (-)
LOC110510546 LOC106575482 other downstream 494252 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 536397 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 569191 17640874 ~ 17671930 (-)
G1522794 NA other downstream 788972 17441659 ~ 17450178 (-)
G1523149 fndc3b other upstream 192408 18432093 ~ 18436052 (-)
G1523234 NA other upstream 301460 18541145 ~ 18541711 (-)
G1523241 NA other upstream 322221 18561906 ~ 18567247 (-)
G1524311 NA other upstream 509440 18749125 ~ 18749395 (-)

Expression


Co-expression Network