Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522605 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 18241264 ~ 18242350 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743322 | True | 1087 | lncRNA | 0.41 | 1 | 18241264 | 18242350 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517300 | LOC106575446 | coding | upstream | 17124 | 18176721 ~ 18224140 (+) |
| LOC110495710 | LOC106574671 | coding | upstream | 82763 | 18156850 ~ 18158501 (+) |
| LOC110495707 | LOC106574672 | coding | upstream | 95783 | 18143136 ~ 18145481 (+) |
| LOC110495694 | LOC106575448 | coding | upstream | 104325 | 18129571 ~ 18136939 (+) |
| atr | atr | coding | upstream | 111901 | 18097563 ~ 18129363 (+) |
| LOC110497069 | ppp2r3a | coding | downstream | 9388 | 18251738 ~ 18305237 (+) |
| LOC110495706 | LOC105019796 | coding | downstream | 67631 | 18309981 ~ 18432516 (+) |
| LOC110497071 | LOC106574566 | coding | downstream | 206084 | 18448434 ~ 18480492 (+) |
| tspan37 | LOC106574474 | coding | downstream | 238427 | 18480777 ~ 18484626 (+) |
| elavl1a | LOC106574475 | coding | downstream | 246372 | 18488722 ~ 18498859 (+) |
| G1522604 | NA | non-coding | upstream | 80 | 18239909 ~ 18241184 (+) |
| G1522601 | LOC106575419 | non-coding | upstream | 5083 | 18231890 ~ 18236181 (+) |
| G1522563 | NA | non-coding | upstream | 9877 | 18224782 ~ 18231387 (+) |
| G1522600 | NA | non-coding | upstream | 23488 | 18216640 ~ 18217776 (+) |
| G1522606 | NA | non-coding | downstream | 1945 | 18244295 ~ 18244526 (+) |
| G1522639 | NA | non-coding | downstream | 16580 | 18258930 ~ 18259151 (+) |
| G1522640 | NA | non-coding | downstream | 18862 | 18261212 ~ 18261496 (+) |
| G1522641 | NA | non-coding | downstream | 19462 | 18261812 ~ 18262056 (+) |
| G1522438 | NA | other | upstream | 380650 | 17856141 ~ 17860614 (+) |
| G1522437 | LOC106575479 | other | upstream | 397250 | 17839669 ~ 17844014 (+) |
| G1522415 | LOC106575491 | other | upstream | 474570 | 17766219 ~ 17766694 (+) |
| LOC110527374 | LOC106592210 | other | upstream | 613620 | 17623786 ~ 17631132 (+) |
| LOC110495674 | LOC106575504 | other | upstream | 1772841 | 16454118 ~ 16468453 (+) |
| G1522684 | NA | other | downstream | 136737 | 18379087 ~ 18380258 (+) |
| LOC110495728 | LOC106574584 | other | downstream | 351984 | 18594324 ~ 18595682 (+) |
| LOC118936474 | LOC106574488 | other | downstream | 473512 | 18702289 ~ 18722091 (+) |
| LOC110495746 | LOC106574508 | other | downstream | 717094 | 18959384 ~ 18978475 (+) |
| G1523506 | NA | other | downstream | 779655 | 19022005 ~ 19022395 (+) |
