Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522714 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 18541158 ~ 18541702 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743444 | True | 385 | lncRNA | 0.49 | 2 | 18541158 | 18541702 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| elavl1a | LOC106574475 | coding | upstream | 42299 | 18488722 ~ 18498859 (+) |
| tspan37 | LOC106574474 | coding | upstream | 56534 | 18480777 ~ 18484626 (+) |
| LOC110497071 | LOC106574566 | coding | upstream | 60666 | 18448434 ~ 18480492 (+) |
| LOC110495706 | LOC105019796 | coding | upstream | 108642 | 18309981 ~ 18432516 (+) |
| LOC110497069 | ppp2r3a | coding | upstream | 235921 | 18251738 ~ 18305237 (+) |
| LOC110495722 | NA | coding | downstream | 196 | 18541898 ~ 18544024 (+) |
| LOC110495724 | LOC106575427 | coding | downstream | 8338 | 18550040 ~ 18554461 (+) |
| diras1b | LOC106574480 | coding | downstream | 13853 | 18555555 ~ 18564107 (+) |
| LOC110495726 | NA | coding | downstream | 29049 | 18570751 ~ 18622066 (+) |
| LOC110495727 | LOC106574482 | coding | downstream | 37946 | 18579648 ~ 18587279 (+) |
| G1522725 | NA | non-coding | upstream | 38926 | 18501725 ~ 18502232 (+) |
| G1522716 | NA | non-coding | upstream | 67159 | 18472780 ~ 18473999 (+) |
| G1522637 | NA | non-coding | upstream | 68534 | 18463922 ~ 18472624 (+) |
| G1522708 | NA | non-coding | upstream | 72669 | 18467509 ~ 18468489 (+) |
| G1522717 | NA | non-coding | downstream | 2962 | 18544664 ~ 18546925 (+) |
| G1522763 | NA | non-coding | downstream | 83607 | 18625309 ~ 18625721 (+) |
| G1522764 | NA | non-coding | downstream | 84452 | 18626154 ~ 18626430 (+) |
| G1522684 | NA | other | upstream | 160900 | 18379087 ~ 18380258 (+) |
| G1522438 | NA | other | upstream | 680544 | 17856141 ~ 17860614 (+) |
| G1522437 | LOC106575479 | other | upstream | 697144 | 17839669 ~ 17844014 (+) |
| G1522415 | LOC106575491 | other | upstream | 774464 | 17766219 ~ 17766694 (+) |
| LOC110527374 | LOC106592210 | other | upstream | 913514 | 17623786 ~ 17631132 (+) |
| LOC110495728 | LOC106574584 | other | downstream | 52632 | 18594324 ~ 18595682 (+) |
| LOC118936474 | LOC106574488 | other | downstream | 174160 | 18702289 ~ 18722091 (+) |
| LOC110495746 | LOC106574508 | other | downstream | 417742 | 18959384 ~ 18978475 (+) |
| G1523506 | NA | other | downstream | 480303 | 19022005 ~ 19022395 (+) |
| G1523526 | LOC106574589 | other | downstream | 584562 | 19101756 ~ 19142175 (+) |
