G1523230


Basic Information

Item Value
gene id G1523230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18552764 ~ 18554450 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744072
TTTGATTTATTAAAGACAATGAGAATAGAGAacatactaaacaaaaatacttTCCAGTTCAGTTTACATACATAAATATTCATTTTGTTCCGGCAGGGTGATGGAGTAAACATATTTGGCACAGATCTGCAGACATTGTGGAGACATGCTACTGTATGCACTAATTACAAGAGACTGAAATAACATGGCTACTTTGTAGGAAATGACCCAGCTCAGAATGGCTCTATCCCAAACATACCCCTAGACACCTCCATTAGCCCCTACCCCCTGGTACCGTGTTTCCCAATCCATTATTACGGGGCCATTTTTGTTCTAGCCCAGCACTAACCCACCTGGTTTAACAAGCTAATTTATCACAGTCTGACTTATTGAATctggtgtgttagtgctggggtAGGTCAAAGGGGGAAATTGGCTAAGGGTGGATTTGTGAGGTCAACGTGGcactgtcgagagagagagagagtctccaCTGATTCACAGACATCTACAGCACATGGGTTACCTGACAGTAGGCTACAGATTACATTAAGACATTCGCATTGTTTAGAGGTCAGCTGGATTGTGTGGTGGCTACCCTAAGCTTCTGGTTGCATTCCAACCGGTCTTTAAAAACAGGTCACGCTGCGCCGATTATCAGATGCCACAACGCCTGGATTATGGGAAACTCATCATATAACATTGATACATGCAACTTAAAAAGACAGACTAGAACATGAAAAAACAAACAAGTCCCTTGTGTGTGCTGCAGGGTGGTCACCGGCCACTGATCACGTGACACGGTCCATTATCGTCCTTCACGGGACATCACACACTCTgttgtgtggttctgtgtgtttattggaGTCGAGGCGTCTGAGGCTTGTGGTCATACATCGGTCGGTCACTGGTTCTTGTCATTCTTGAGGACCTGGTTGACagCTTCTTTCGTGACAGTGTCAGCCATGTTCTTGGCCTTATCACTCAGGTTGTTGACGACACTGTCCAGGGTGGCCTGGTGTCTGAGGAACACGGGACGGACCACACGGGAGTAGAGAATAGCAGAACCGTTCCACGTCACCGGAGCCATACACCACACCAGGAACAAACACTGtaggagagagggattgagagagataTTCTATGATGATCTTCTTTTGGCCTCCTGTATATtgaatgttacacacacacaccttgccagCATAGTAGAAGGGGAACCAGGAGAGGAAGATGTCAGAGAAAGCCTCTGCAATACTGAAGAATCCGTAGACCACCCAGTAGGTCAACCACTGAGTGTCATCGTCTTTCTTCTTACTCTCTATGGCCTTGAT

Function

NR:

description
receptor expression-enhancing protein 6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744072 True 1310 lncRNA 0.46 2 18552764 18554450

Neighbor

gene id symbol gene type direction distance location
LOC110497072 LOC106574477 coding downstream 38901 18499826 ~ 18513863 (-)
ghs-r ghsr coding downstream 105461 18445083 ~ 18447303 (-)
LOC110497068 LOC106574469 coding downstream 314871 18231889 ~ 18237893 (-)
LOC110495699 LOC106574468 coding downstream 321340 18224782 ~ 18231424 (-)
LOC110495700 LOC106594337 coding downstream 385401 18160955 ~ 18167363 (-)
LOC118941108 LOC106575244 coding upstream 41334 18595784 ~ 18603170 (-)
LOC110495729 LOC106574585 coding upstream 50147 18604597 ~ 18617046 (-)
LOC110497079 LOC106575437 coding upstream 74641 18629091 ~ 18643487 (-)
LOC110495732 LOC106574489 coding upstream 196319 18750769 ~ 18764433 (-)
LOC110495738 LOC106574497 coding upstream 309086 18863536 ~ 18878944 (-)
G1523289 NA non-coding downstream 62873 18488700 ~ 18489891 (-)
G1523160 NA non-coding downstream 234227 18318043 ~ 18318537 (-)
G1523143 NA non-coding downstream 249924 18302502 ~ 18302840 (-)
G1523137 NA non-coding downstream 254782 18296479 ~ 18297982 (-)
G1523102 NA non-coding downstream 294436 18253215 ~ 18258328 (-)
G1523315 NA non-coding upstream 16619 18571069 ~ 18572942 (-)
G1523291 NA non-coding upstream 21226 18575676 ~ 18579183 (-)
G1523333 NA non-coding upstream 55714 18610164 ~ 18611225 (-)
G1523341 NA non-coding upstream 69019 18623469 ~ 18623969 (-)
G1523340 NA non-coding upstream 70713 18625163 ~ 18625642 (-)
G1523234 NA other downstream 11053 18541145 ~ 18541711 (-)
G1523149 fndc3b other downstream 116712 18432093 ~ 18436052 (-)
LOC118941107 NA other downstream 498939 18051980 ~ 18054354 (-)
LOC110510546 LOC106575482 other downstream 807866 17719504 ~ 17815003 (-)
G1523241 NA other upstream 7456 18561906 ~ 18567247 (-)
G1524311 NA other upstream 194675 18749125 ~ 18749395 (-)
G1524473 LOC106574589 other upstream 589535 19143985 ~ 19164126 (-)
LOC110495764 LOC106574529 other upstream 1019178 19573628 ~ 19577133 (-)
G1524755 LOC106581475 other upstream 1168295 19722745 ~ 19730068 (-)

Expression


Co-expression Network