G1523341


Basic Information

Item Value
gene id G1523341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18623469 ~ 18623969 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744212
ggcacgttcacgcagatgagcagggaccctgggcatctgtCTTTTTTcatttttccagagtcagtagaaaggcctctttagtgtcctaagttttcataactgtgaccttaattgcctactgtctgtaagctgttagtgtcttaacgaccgttccacagatgcatgttcattaattgtttatggttcattgaacaagcatgggaaacagtgtgaAAACCCTTTAACAATGTAGAAAGATTGGAATTTTgccaattatctttgaaagacagggtcatgaataagggacgtttctttttttgctgagtttagttacattttgaatgcttagcaggacacgAAAATGGACTAATtcgcacacttatcaagagaacatccctgatcatcccgaATGCCTCCAatttggcagactcactaaacacaaatgcttagtttaaatgatgtctgagtgttgaagtgtgctcttggctatccgtaaatttaaaaaacaagaaaatcatgcCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744212 True 501 lncRNA 0.39 1 18623469 18623969

Neighbor

gene id symbol gene type direction distance location
LOC110495729 LOC106574585 coding downstream 6423 18604597 ~ 18617046 (-)
LOC118941108 LOC106575244 coding downstream 20299 18595784 ~ 18603170 (-)
LOC110497072 LOC106574477 coding downstream 109606 18499826 ~ 18513863 (-)
ghs-r ghsr coding downstream 176166 18445083 ~ 18447303 (-)
LOC110497068 LOC106574469 coding downstream 385576 18231889 ~ 18237893 (-)
LOC110497079 LOC106575437 coding upstream 5122 18629091 ~ 18643487 (-)
LOC110495732 LOC106574489 coding upstream 126800 18750769 ~ 18764433 (-)
LOC110495738 LOC106574497 coding upstream 239567 18863536 ~ 18878944 (-)
LOC110495742 thegl coding upstream 258996 18882965 ~ 18904709 (-)
LOC110495739 LOC106575386 coding upstream 267752 18891721 ~ 18896278 (-)
G1523333 NA non-coding downstream 12244 18610164 ~ 18611225 (-)
G1523291 NA non-coding downstream 44286 18575676 ~ 18579183 (-)
G1523315 NA non-coding downstream 50527 18571069 ~ 18572942 (-)
G1523230 NA non-coding downstream 69019 18552764 ~ 18554450 (-)
G1523289 NA non-coding downstream 133578 18488700 ~ 18489891 (-)
G1523340 NA non-coding upstream 1194 18625163 ~ 18625642 (-)
G1523342 NA non-coding upstream 2153 18626122 ~ 18626391 (-)
G1523328 NA non-coding upstream 2574 18626543 ~ 18627241 (-)
G1523343 NA non-coding upstream 9335 18633304 ~ 18634541 (-)
G1523347 NA non-coding upstream 20931 18644900 ~ 18645108 (-)
G1523241 NA other downstream 56222 18561906 ~ 18567247 (-)
G1523234 NA other downstream 81758 18541145 ~ 18541711 (-)
G1523149 fndc3b other downstream 187417 18432093 ~ 18436052 (-)
LOC118941107 NA other downstream 569644 18051980 ~ 18054354 (-)
G1524311 NA other upstream 125156 18749125 ~ 18749395 (-)
G1524473 LOC106574589 other upstream 520016 19143985 ~ 19164126 (-)
LOC110495764 LOC106574529 other upstream 949659 19573628 ~ 19577133 (-)
G1524755 LOC106581475 other upstream 1098776 19722745 ~ 19730068 (-)
LOC110497093 LOC106574562 other upstream 1947127 20558557 ~ 20595753 (-)

Expression


Co-expression Network