G1523342


Basic Information

Item Value
gene id G1523342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18626122 ~ 18626391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744215
GATATAGAACTGAAGTGATGTTCAGAGGTCAAAGAGAATAGCAAACTGGATATAGAACTGAAGTGATGTTCATAGGTCAAAGAGAATAGCAAACTGGATATAGAACTGAAGTGATGTTCAGAGGTCAAAGAGGATAGCAAACTGGATATAGAACTGAAGTGATGTTCAGAGGTCAAAGAGAATAGCAAACTGGATATAGAACTGAAGTGATGTTCAGAGGTCAAAGAGAATAGCAAACTGGATATAGAACTGAAGTGATGTTCAGAGGTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586862

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744215 True 270 lncRNA 0.38 1 18626122 18626391

Neighbor

gene id symbol gene type direction distance location
LOC110495729 LOC106574585 coding downstream 9076 18604597 ~ 18617046 (-)
LOC118941108 LOC106575244 coding downstream 22952 18595784 ~ 18603170 (-)
LOC110497072 LOC106574477 coding downstream 112259 18499826 ~ 18513863 (-)
ghs-r ghsr coding downstream 178819 18445083 ~ 18447303 (-)
LOC110497068 LOC106574469 coding downstream 388229 18231889 ~ 18237893 (-)
LOC110497079 LOC106575437 coding upstream 2700 18629091 ~ 18643487 (-)
LOC110495732 LOC106574489 coding upstream 124378 18750769 ~ 18764433 (-)
LOC110495738 LOC106574497 coding upstream 237145 18863536 ~ 18878944 (-)
LOC110495742 thegl coding upstream 256574 18882965 ~ 18904709 (-)
LOC110495739 LOC106575386 coding upstream 265330 18891721 ~ 18896278 (-)
G1523340 NA non-coding downstream 480 18625163 ~ 18625642 (-)
G1523341 NA non-coding downstream 2153 18623469 ~ 18623969 (-)
G1523333 NA non-coding downstream 14897 18610164 ~ 18611225 (-)
G1523291 NA non-coding downstream 46939 18575676 ~ 18579183 (-)
G1523315 NA non-coding downstream 53180 18571069 ~ 18572942 (-)
G1523328 NA non-coding upstream 152 18626543 ~ 18627241 (-)
G1523343 NA non-coding upstream 6913 18633304 ~ 18634541 (-)
G1523347 NA non-coding upstream 18509 18644900 ~ 18645108 (-)
G1523349 NA non-coding upstream 22213 18648604 ~ 18648848 (-)
G1523351 NA non-coding upstream 23581 18649972 ~ 18650178 (-)
G1523241 NA other downstream 58875 18561906 ~ 18567247 (-)
G1523234 NA other downstream 84411 18541145 ~ 18541711 (-)
G1523149 fndc3b other downstream 190070 18432093 ~ 18436052 (-)
LOC118941107 NA other downstream 572297 18051980 ~ 18054354 (-)
G1524311 NA other upstream 122734 18749125 ~ 18749395 (-)
G1524473 LOC106574589 other upstream 517594 19143985 ~ 19164126 (-)
LOC110495764 LOC106574529 other upstream 947237 19573628 ~ 19577133 (-)
G1524755 LOC106581475 other upstream 1096354 19722745 ~ 19730068 (-)
LOC110497093 LOC106574562 other upstream 1944705 20558557 ~ 20595753 (-)

Expression


Co-expression Network