G1523343


Basic Information

Item Value
gene id G1523343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18633304 ~ 18634541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744216
ctctctgttgatctgagatttcctctctctctgttgatctgttgtttctactctctctctgttgatctgttgtttctactctctctgttgatctgagatttcctctctctctgttgatctgtcgtttctactctctctctgctgatctgtcgtttctattctctctctgttgatctgacgtttcctctctctctgttgatctg
>TU1744217
atacatttgattggttgaGTTACTACAACAGTGAACAATTAAAATGGTCAATAACTTTACTTTAATTGATCTgttgtttctactctctctccgCTGATCTGTcgtttctattctctctctgttgatctgacgtttcctctctctctgttgatctgacgtttcctctctctctgttgatctgttgtttcctctctctctgttgatctgagatttcctctctctctgttgatctgttatttcctctctctctgttgatctgttgtttctactctctctctgttgatctgttgtttctactctctctgttgatctgagatttcctctctctctgttgatctgtcgtttctactctctctctgctgatctgtcgtttctattctctctctgttgatctgacgtttcctctctctctgttgatctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744216 False 203 lncRNA 0.42 2 18633304 18633737
TU1744217 True 421 lncRNA 0.40 3 18633304 18634541

Neighbor

gene id symbol gene type direction distance location
LOC110495729 LOC106574585 coding downstream 16258 18604597 ~ 18617046 (-)
LOC118941108 LOC106575244 coding downstream 30134 18595784 ~ 18603170 (-)
LOC110497072 LOC106574477 coding downstream 119441 18499826 ~ 18513863 (-)
ghs-r ghsr coding downstream 186001 18445083 ~ 18447303 (-)
LOC110497068 LOC106574469 coding downstream 395411 18231889 ~ 18237893 (-)
LOC110495732 LOC106574489 coding upstream 116228 18750769 ~ 18764433 (-)
LOC110495738 LOC106574497 coding upstream 228995 18863536 ~ 18878944 (-)
LOC110495742 thegl coding upstream 248424 18882965 ~ 18904709 (-)
LOC110495739 LOC106575386 coding upstream 257180 18891721 ~ 18896278 (-)
LOC110495741 LOC106574501 coding upstream 263896 18898437 ~ 18902354 (-)
G1523328 NA non-coding downstream 6063 18626543 ~ 18627241 (-)
G1523342 NA non-coding downstream 6913 18626122 ~ 18626391 (-)
G1523340 NA non-coding downstream 7662 18625163 ~ 18625642 (-)
G1523341 NA non-coding downstream 9335 18623469 ~ 18623969 (-)
G1523333 NA non-coding downstream 22079 18610164 ~ 18611225 (-)
G1523347 NA non-coding upstream 10359 18644900 ~ 18645108 (-)
G1523349 NA non-coding upstream 14063 18648604 ~ 18648848 (-)
G1523351 NA non-coding upstream 15431 18649972 ~ 18650178 (-)
G1523352 NA non-coding upstream 16129 18650670 ~ 18650890 (-)
G1523311 LOC106574487 non-coding upstream 34897 18669438 ~ 18672666 (-)
G1523241 NA other downstream 66057 18561906 ~ 18567247 (-)
G1523234 NA other downstream 91593 18541145 ~ 18541711 (-)
G1523149 fndc3b other downstream 197252 18432093 ~ 18436052 (-)
LOC118941107 NA other downstream 579479 18051980 ~ 18054354 (-)
G1524311 NA other upstream 114584 18749125 ~ 18749395 (-)
G1524473 LOC106574589 other upstream 509444 19143985 ~ 19164126 (-)
LOC110495764 LOC106574529 other upstream 939087 19573628 ~ 19577133 (-)
G1524755 LOC106581475 other upstream 1088204 19722745 ~ 19730068 (-)
LOC110497093 LOC106574562 other upstream 1936555 20558557 ~ 20595753 (-)

Expression


Co-expression Network