G1523487


Basic Information

Item Value
gene id G1523487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18955909 ~ 18956212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744409
gtgtgtgtgcgacTGTTAAAACCCTTCTTTAAGAGGACATGCAATCTGGATCCTATTTAACATCCATGTGTTTTTATTTCAGGGCTCTAAGGTCAGATGTACTTGACTCTGCTCCAACTGTTTAAAAGTTTGCCATTTTTGACACACAGTATCAAAACTTTACTTAGATTGAAGTGGTGATATTTGACATTCTGATCCCAAagcctgtgcatgtgtgtgtgcttgtgtgcctATGATATGACTGTACAGagttgtgttctgtcagaaataGGGCAGGTTAGGTCATAGACAGTTTCATAAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744409 True 304 lncRNA 0.40 1 18955909 18956212

Neighbor

gene id symbol gene type direction distance location
keap1a LOC106574506 coding upstream 9273 18925186 ~ 18946636 (+)
ebi3 ebi-3 coding upstream 50505 18903865 ~ 18905404 (+)
LOC110495737 LOC106574496 coding upstream 103047 18842536 ~ 18852862 (+)
LOC110495735 LOC106574495 coding upstream 113797 18806958 ~ 18842112 (+)
LOC110495734 LOC106574494 coding upstream 156026 18792397 ~ 18799883 (+)
LOC110495746 LOC106574508 coding downstream 3172 18959384 ~ 18978475 (+)
LOC110495744 LOC106575417 coding downstream 22590 18978802 ~ 18982514 (+)
LOC110513694 LOC106574589 coding downstream 36219 18992431 ~ 18999113 (+)
LOC118941110 LOC106574589 coding downstream 51615 19007827 ~ 19010326 (+)
LOC118941111 NA coding downstream 74009 19030221 ~ 19033974 (+)
G1523449 NA non-coding upstream 73488 18882031 ~ 18882421 (+)
G1523446 NA non-coding upstream 76992 18878257 ~ 18878917 (+)
G1523445 NA non-coding upstream 78054 18877555 ~ 18877855 (+)
G1523444 NA non-coding upstream 81506 18873939 ~ 18874403 (+)
G1523443 NA non-coding upstream 82896 18872788 ~ 18873013 (+)
G1523488 NA non-coding downstream 807 18957019 ~ 18957371 (+)
G1523498 NA non-coding downstream 35103 18991315 ~ 18991585 (+)
G1523517 NA non-coding downstream 95354 19051566 ~ 19052036 (+)
G1523525 NA non-coding downstream 144557 19100769 ~ 19141665 (+)
G1523526 LOC106574589 non-coding downstream 145544 19101756 ~ 19142175 (+)
LOC118936474 LOC106574488 other upstream 237264 18702289 ~ 18722091 (+)
LOC110495728 LOC106574584 other upstream 360309 18594324 ~ 18595682 (+)
G1522684 NA other upstream 575651 18379087 ~ 18380258 (+)
G1522438 NA other upstream 1095295 17856141 ~ 17860614 (+)
G1522437 LOC106575479 other upstream 1111895 17839669 ~ 17844014 (+)
G1523506 NA other downstream 65793 19022005 ~ 19022395 (+)
LOC118941116 LOC106574589 other downstream 219651 19168683 ~ 19177819 (+)
G1523542 NA other downstream 244815 19201027 ~ 19202188 (+)

Expression


Co-expression Network