Gene
RNA
| Item | Value |
|---|---|
| gene id | G1523498 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 18991315 ~ 18991585 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1744420 | True | 210 | lncRNA | 0.28 | 2 | 18991315 | 18991585 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495744 | LOC106575417 | coding | upstream | 8801 | 18978802 ~ 18982514 (+) |
| LOC110495746 | LOC106574508 | coding | upstream | 12840 | 18959384 ~ 18978475 (+) |
| keap1a | LOC106574506 | coding | upstream | 44679 | 18925186 ~ 18946636 (+) |
| ebi3 | ebi-3 | coding | upstream | 85911 | 18903865 ~ 18905404 (+) |
| LOC110495737 | LOC106574496 | coding | upstream | 138453 | 18842536 ~ 18852862 (+) |
| LOC110513694 | LOC106574589 | coding | downstream | 846 | 18992431 ~ 18999113 (+) |
| LOC118941110 | LOC106574589 | coding | downstream | 16242 | 19007827 ~ 19010326 (+) |
| LOC118941111 | NA | coding | downstream | 38636 | 19030221 ~ 19033974 (+) |
| LOC110495747 | LOC106574589 | coding | downstream | 44955 | 19036540 ~ 19039332 (+) |
| LOC118941064 | LOC106574589 | coding | downstream | 53483 | 19045068 ~ 19050250 (+) |
| G1523488 | NA | non-coding | upstream | 33944 | 18957019 ~ 18957371 (+) |
| G1523487 | NA | non-coding | upstream | 35103 | 18955909 ~ 18956212 (+) |
| G1523449 | NA | non-coding | upstream | 108894 | 18882031 ~ 18882421 (+) |
| G1523446 | NA | non-coding | upstream | 112398 | 18878257 ~ 18878917 (+) |
| G1523445 | NA | non-coding | upstream | 113460 | 18877555 ~ 18877855 (+) |
| G1523517 | NA | non-coding | downstream | 59981 | 19051566 ~ 19052036 (+) |
| G1523525 | NA | non-coding | downstream | 109184 | 19100769 ~ 19141665 (+) |
| G1523526 | LOC106574589 | non-coding | downstream | 110171 | 19101756 ~ 19142175 (+) |
| G1523542 | NA | non-coding | downstream | 209517 | 19201027 ~ 19202188 (+) |
| G1523570 | NA | non-coding | downstream | 244101 | 19235686 ~ 19235905 (+) |
| LOC118936474 | LOC106574488 | other | upstream | 272670 | 18702289 ~ 18722091 (+) |
| LOC110495728 | LOC106574584 | other | upstream | 395715 | 18594324 ~ 18595682 (+) |
| G1522684 | NA | other | upstream | 611057 | 18379087 ~ 18380258 (+) |
| G1522438 | NA | other | upstream | 1130701 | 17856141 ~ 17860614 (+) |
| G1523506 | NA | other | downstream | 30420 | 19022005 ~ 19022395 (+) |
| LOC118941116 | LOC106574589 | other | downstream | 184278 | 19168683 ~ 19177819 (+) |
| otomp | omp-1 | other | downstream | 214647 | 19206164 ~ 19211574 (+) |
