G1524422



Basic Information


Item Value
gene id G1524422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18991452 ~ 18991741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1745475
AAGCAGAAAATATATACAGAGCAAATGTATGAGATTGAACACATACATTTCACAATGAACAGTTGATCTGACCCCCATTTTGCAGTTTCACTATGGCTTTAGTCATCAGTCAAGAGGGACACATTTTATTAAGGTAGTTGTGTTTCAGGGACTGTCAGTTTAACAGGTTTTAAATCTTAAAGTGATCTAATCAAACAAATcctctctgtcacattcctctccatcatattcctctctatcatacTCCTCTTTATCATACTATCATAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1745475 True 267 lncRNA 0.35 2 18991452 18991741

Neighbor


gene id symbol gene type direction distance location
crlf1a LOC106575381 coding downstream 75764 18909006 ~ 18915688 (-)
LOC110497081 NA coding downstream 83494 18905515 ~ 18907958 (-)
LOC110495741 LOC106574501 coding downstream 89098 18898437 ~ 18902354 (-)
LOC110495739 LOC106575386 coding downstream 95174 18891721 ~ 18896278 (-)
LOC110495742 thegl coding downstream 105232 18882965 ~ 18904709 (-)
acvr1l LOC106574510 coding upstream 195666 19187407 ~ 19200059 (-)
LOC110495751 LOC106574518 coding upstream 330915 19322656 ~ 19384501 (-)
LOC118936284 LOC106574517 coding upstream 362135 19353876 ~ 19373333 (-)
LOC110495759 LOC106586086 coding upstream 482568 19474309 ~ 19475867 (-)
LOC110495761 LOC106574524 coding upstream 497320 19489061 ~ 19495122 (-)
G1524421 NA non-coding downstream 221 18990970 ~ 18991231 (-)
G1524418 LOC106575417 non-coding downstream 8370 18980780 ~ 18983082 (-)
G1524417 LOC106575417 non-coding downstream 11246 18979892 ~ 18980206 (-)
G1524400 NA non-coding downstream 36976 18954242 ~ 18954476 (-)
G1524398 NA non-coding downstream 39184 18952025 ~ 18952268 (-)
G1524423 NA non-coding upstream 1723 18993464 ~ 18993760 (-)
G1524429 NA non-coding upstream 26621 19018362 ~ 19018838 (-)
G1524431 NA non-coding upstream 35353 19027094 ~ 19028192 (-)
G1524440 NA non-coding upstream 59324 19051065 ~ 19051825 (-)
G1524441 NA non-coding upstream 60192 19051933 ~ 19052469 (-)
G1524311 NA other downstream 242057 18749125 ~ 18749395 (-)
G1523241 NA other downstream 424205 18561906 ~ 18567247 (-)
G1523234 NA other downstream 449741 18541145 ~ 18541711 (-)
ghs-r ghsr other downstream 544891 18445083 ~ 18447303 (-)
G1523149 fndc3b other downstream 555400 18432093 ~ 18436052 (-)
G1524473 LOC106574589 other upstream 152244 19143985 ~ 19164126 (-)
LOC110495764 LOC106574529 other upstream 581887 19573628 ~ 19577133 (-)
G1524755 LOC106581475 other upstream 731004 19722745 ~ 19730068 (-)
LOC110497093 LOC106574562 other upstream 1579355 20558557 ~ 20595753 (-)
G1527230 NA other upstream 3270315 22262056 ~ 22262462 (-)

Expression



Co-expression Network