G1523517


Basic Information

Item Value
gene id G1523517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19051566 ~ 19052036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744452
atataaatatttatagtaatattatttgaatgtggcgctctgcaattcagcggttgttgatgaaaaTTATCCTAACGTTAACGGAATGGGTAGCGTCAATTAGTTTTTaacaaggtaggccagttgagaaccagttctcacttacaactgcaacctgaccaagataaaacaaatcagtgcgacaaaaacaacacagagttgcacatgggttaaacaaacgtacagttaaTAGCATAATAGTAAAAATCTATGTTCAGAGTGTGCAAACGTAATAATATTAATGAGGTAAGGCAaaaaaataggccatagaggcgaaataactACAAATTatcattaatactggagtgatagatgtgcagagtatcatgtgcaagtagagatactggggtacaaaagagaaaaataaataaataaccgattatgatttttcaacaccaataccgataccaattattggagcaccaaaaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744452 True 471 lncRNA 0.34 1 19051566 19052036

Neighbor

gene id symbol gene type direction distance location
LOC118941064 LOC106574589 coding upstream 1316 19045068 ~ 19050250 (+)
LOC110495747 LOC106574589 coding upstream 12234 19036540 ~ 19039332 (+)
LOC118941111 NA coding upstream 17592 19030221 ~ 19033974 (+)
LOC118941110 LOC106574589 coding upstream 41240 19007827 ~ 19010326 (+)
LOC110513694 LOC106574589 coding upstream 52453 18992431 ~ 18999113 (+)
LOC118941112 LOC106574589 coding downstream 3613 19055649 ~ 19064884 (+)
LOC110496918 LOC106574589 coding downstream 25074 19077110 ~ 19079615 (+)
LOC118941113 NA coding downstream 49818 19101854 ~ 19105354 (+)
LOC118941065 LOC106574589 coding downstream 60983 19113019 ~ 19118762 (+)
LOC118941066 LOC106574589 coding downstream 75973 19128009 ~ 19133673 (+)
G1523498 NA non-coding upstream 59981 18991315 ~ 18991585 (+)
G1523488 NA non-coding upstream 94195 18957019 ~ 18957371 (+)
G1523487 NA non-coding upstream 95354 18955909 ~ 18956212 (+)
G1523449 NA non-coding upstream 169145 18882031 ~ 18882421 (+)
G1523446 NA non-coding upstream 172649 18878257 ~ 18878917 (+)
G1523525 NA non-coding downstream 48733 19100769 ~ 19141665 (+)
G1523526 LOC106574589 non-coding downstream 49720 19101756 ~ 19142175 (+)
G1523542 NA non-coding downstream 149066 19201027 ~ 19202188 (+)
G1523570 NA non-coding downstream 183650 19235686 ~ 19235905 (+)
G1523571 NA non-coding downstream 185018 19237054 ~ 19265291 (+)
G1523506 NA other upstream 29171 19022005 ~ 19022395 (+)
LOC110495746 LOC106574508 other upstream 77562 18959384 ~ 18978475 (+)
LOC118936474 LOC106574488 other upstream 332921 18702289 ~ 18722091 (+)
LOC110495728 LOC106574584 other upstream 455966 18594324 ~ 18595682 (+)
G1522684 NA other upstream 671308 18379087 ~ 18380258 (+)
LOC118941116 LOC106574589 other downstream 123827 19168683 ~ 19177819 (+)
otomp omp-1 other downstream 154196 19206164 ~ 19211574 (+)
G1523614 NA other downstream 325031 19377067 ~ 19378472 (+)

Expression


Co-expression Network