Gene
RNA
| Item | Value |
|---|---|
| gene id | G1523526 |
| gene name | LOC106574589 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19101756 ~ 19142175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized abhydrolase domain-containing protein DDB_G0269086-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1744468 | False | 284 | lncRNA | 0.38 | 2 | 19101756 | 19142175 |
| TU1744463 | False | 730 | lncRNA | 0.41 | 2 | 19102579 | 19128475 |
| TU1744469 | True | 553 | TUCP | 0.50 | 3 | 19126264 | 19130785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496918 | LOC106574589 | coding | upstream | 22141 | 19077110 ~ 19079615 (+) |
| LOC118941112 | LOC106574589 | coding | upstream | 36872 | 19055649 ~ 19064884 (+) |
| LOC118941064 | LOC106574589 | coding | upstream | 51506 | 19045068 ~ 19050250 (+) |
| LOC110495747 | LOC106574589 | coding | upstream | 62424 | 19036540 ~ 19039332 (+) |
| LOC118941111 | NA | coding | upstream | 67782 | 19030221 ~ 19033974 (+) |
| LOC118941115 | LOC106574589 | coding | downstream | 11779 | 19153954 ~ 19163071 (+) |
| LOC118941116 | LOC106574589 | coding | downstream | 26508 | 19168683 ~ 19177819 (+) |
| LOC118936408 | LOC106575380 | coding | downstream | 40243 | 19182418 ~ 19184256 (+) |
| LOC110497082 | LOC106575380 | coding | downstream | 42120 | 19184295 ~ 19186194 (+) |
| LOC118941045 | NA | coding | downstream | 61361 | 19203536 ~ 19205195 (+) |
| G1523517 | NA | non-coding | upstream | 49720 | 19051566 ~ 19052036 (+) |
| G1523498 | NA | non-coding | upstream | 110171 | 18991315 ~ 18991585 (+) |
| G1523488 | NA | non-coding | upstream | 144385 | 18957019 ~ 18957371 (+) |
| G1523487 | NA | non-coding | upstream | 145544 | 18955909 ~ 18956212 (+) |
| G1523449 | NA | non-coding | upstream | 219335 | 18882031 ~ 18882421 (+) |
| G1523542 | NA | non-coding | downstream | 58927 | 19201027 ~ 19202188 (+) |
| G1523570 | NA | non-coding | downstream | 93511 | 19235686 ~ 19235905 (+) |
| G1523571 | NA | non-coding | downstream | 94879 | 19237054 ~ 19265291 (+) |
| G1523575 | NA | non-coding | downstream | 108760 | 19250935 ~ 19255872 (+) |
| G1523590 | NA | non-coding | downstream | 145222 | 19287397 ~ 19287613 (+) |
| G1523506 | NA | other | upstream | 79361 | 19022005 ~ 19022395 (+) |
| LOC110495746 | LOC106574508 | other | upstream | 127752 | 18959384 ~ 18978475 (+) |
| LOC118936474 | LOC106574488 | other | upstream | 383111 | 18702289 ~ 18722091 (+) |
| LOC110495728 | LOC106574584 | other | upstream | 506156 | 18594324 ~ 18595682 (+) |
| G1522684 | NA | other | upstream | 721498 | 18379087 ~ 18380258 (+) |
| otomp | omp-1 | other | downstream | 64057 | 19206164 ~ 19211574 (+) |
| G1523614 | NA | other | downstream | 234892 | 19377067 ~ 19378472 (+) |
| LOC110495755 | LOC106574522 | other | downstream | 299870 | 19436699 ~ 19444433 (+) |
| LOC118941065 | LOC106574589 | coding | upstream | 7502 | 19113019 ~ 19118762 (+) |
| LOC118941113 | NA | coding | upstream | 20910 | 19101854 ~ 19105354 (+) |
| LOC118941114 | LOC106574589 | coding | downstream | 8614 | 19139399 ~ 19148567 (+) |
