G1523570


Basic Information

Item Value
gene id G1523570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19235686 ~ 19235905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744522
ATTCAGTAGTCCTACCTCTCCTGGACAGCATTCAGTAGTCCTACCCCTCCTGGACAGCATTCAGTAGGCCTACCTCTCCTGGCCAACATTTAGTAGTCCTACCCCTCCTGGACAGCATTCAGTAGGCCTACCCCTCCTGGACAGCATTCAGGAGTCCTACCCCTCCTGGACAGCATTCAGTAGTCCTACCCCTCCTGGACAGCATTCAGTAGTCCTACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744522 True 220 lncRNA 0.55 1 19235686 19235905

Neighbor

gene id symbol gene type direction distance location
otomp omp-1 coding upstream 24112 19206164 ~ 19211574 (+)
LOC118941045 NA coding upstream 30491 19203536 ~ 19205195 (+)
LOC110497082 LOC106575380 coding upstream 49492 19184295 ~ 19186194 (+)
LOC118936408 LOC106575380 coding upstream 51430 19182418 ~ 19184256 (+)
LOC118941116 LOC106574589 coding upstream 57867 19168683 ~ 19177819 (+)
LOC110495749 LOC106575379 coding downstream 27261 19263166 ~ 19286263 (+)
LOC110495750 LOC106574515 coding downstream 59614 19295519 ~ 19321171 (+)
LOC110495753 LOC106574519 coding downstream 171739 19407644 ~ 19414042 (+)
LOC110495754 ola1 coding downstream 188344 19424249 ~ 19434856 (+)
LOC110495755 LOC106574522 coding downstream 200794 19436699 ~ 19444433 (+)
G1523542 NA non-coding upstream 33498 19201027 ~ 19202188 (+)
G1523526 LOC106574589 non-coding upstream 93511 19101756 ~ 19142175 (+)
G1523525 NA non-coding upstream 94021 19100769 ~ 19141665 (+)
G1523517 NA non-coding upstream 183650 19051566 ~ 19052036 (+)
G1523498 NA non-coding upstream 244101 18991315 ~ 18991585 (+)
G1523571 NA non-coding downstream 1149 19237054 ~ 19265291 (+)
G1523575 NA non-coding downstream 15030 19250935 ~ 19255872 (+)
G1523590 NA non-coding downstream 51492 19287397 ~ 19287613 (+)
G1523591 NA non-coding downstream 52575 19288480 ~ 19288702 (+)
G1523592 NA non-coding downstream 53161 19289066 ~ 19289318 (+)
G1523506 NA other upstream 213291 19022005 ~ 19022395 (+)
G1523614 NA other downstream 141162 19377067 ~ 19378472 (+)
G1523703 LOC106575364 other downstream 270487 19506392 ~ 19507256 (+)
LOC110495769 LOC106575326 other downstream 514827 19748427 ~ 19761242 (+)
G1523847 NA other downstream 539187 19775092 ~ 19827966 (+)

Expression


Co-expression Network