G1523590


Basic Information

Item Value
gene id G1523590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19287397 ~ 19287613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744545
CTGTGACACTGAGTTCATAGAGGGTCCTTCTAAAGAACATAGCCcagagtctgtgtgtctgtattgcTTGTTAATGTCAAATAAATATACAGTAGAGCCCCACTGACACCCAGAGATTTATACTGTCCAGTCTATCTGGCCATGACCCATGGCTTGCCCTCTTGGACCCTCGGTTGAATTACCAGTAATCAGACatttatggacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744545 True 217 lncRNA 0.45 1 19287397 19287613

Neighbor

gene id symbol gene type direction distance location
LOC110495749 LOC106575379 coding upstream 1134 19263166 ~ 19286263 (+)
otomp omp-1 coding upstream 75823 19206164 ~ 19211574 (+)
LOC118941045 NA coding upstream 82202 19203536 ~ 19205195 (+)
LOC110497082 LOC106575380 coding upstream 101203 19184295 ~ 19186194 (+)
LOC118936408 LOC106575380 coding upstream 103141 19182418 ~ 19184256 (+)
LOC110495750 LOC106574515 coding downstream 7906 19295519 ~ 19321171 (+)
LOC110495753 LOC106574519 coding downstream 120031 19407644 ~ 19414042 (+)
LOC110495754 ola1 coding downstream 136636 19424249 ~ 19434856 (+)
LOC110495755 LOC106574522 coding downstream 149086 19436699 ~ 19444433 (+)
LOC118941117 LOC106574523 coding downstream 171159 19458772 ~ 19460921 (+)
G1523571 NA non-coding upstream 22106 19237054 ~ 19265291 (+)
G1523575 NA non-coding upstream 31525 19250935 ~ 19255872 (+)
G1523570 NA non-coding upstream 51492 19235686 ~ 19235905 (+)
G1523542 NA non-coding upstream 85209 19201027 ~ 19202188 (+)
G1523526 LOC106574589 non-coding upstream 145222 19101756 ~ 19142175 (+)
G1523591 NA non-coding downstream 867 19288480 ~ 19288702 (+)
G1523592 NA non-coding downstream 1453 19289066 ~ 19289318 (+)
G1523594 NA non-coding downstream 3609 19291222 ~ 19291512 (+)
G1523601 LOC106574516 non-coding downstream 36451 19324064 ~ 19327276 (+)
G1523624 NA non-coding downstream 71775 19359388 ~ 19361531 (+)
LOC118941116 LOC106574589 other upstream 110435 19168683 ~ 19177819 (+)
G1523506 NA other upstream 265002 19022005 ~ 19022395 (+)
G1523614 NA other downstream 89454 19377067 ~ 19378472 (+)
G1523703 LOC106575364 other downstream 218779 19506392 ~ 19507256 (+)
LOC110495769 LOC106575326 other downstream 463119 19748427 ~ 19761242 (+)
G1523847 NA other downstream 487479 19775092 ~ 19827966 (+)

Expression


Co-expression Network