G1523763 (LOC106574531)


Basic Information

Item Value
gene id G1523763
gene name LOC106574531
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19593341 ~ 19593891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1744750
ggagggaggagagggagagaggaaaggaggaaggaaggggagagaaggaaaggagggaggagggggagagaaggaaagaaaagtTATTGTCAAATCCATTCATGTTCAAGTCAGTGACAGTACAAGGAGGATTACCAGGAAGTGACAATACAAGGAGGATTACCAGGAAGTGACCGTATCAGGAGGATTACCAGGAAGTGACAGTACCAGGTTTATGATGCAGGCTGTATTGTGACGGTCAACTCTACTTACTGACTTCTCCGTAGGGTAGTGGCAGTAGGGGGGAGTGTAGAGGGTGCTGAGTGTATCTGAGGATGGGATTCCTCCTGTAGGTCTGCTCCACTGCCTCAGGGTTCAGACTGCTGTCCTTGATATCTCTGATGAGCTGTAGTGTCGGTGTTTCTATGGGTGTCTTGCTGTCTATCACTGCCTGTATGGCTGCTATCCATCTCAGAGCTTCATTCAGCATCTTCGTGTAGAGGCGATACGAGTGCTTCCTACCGTGCACTACGATGTTCCAGTACC

Function

NR:

description
LOW QUALITY PROTEIN: unconventional myosin-X-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1744750 True 525 lncRNA 0.50 2 19593341 19593891

Neighbor

gene id symbol gene type direction distance location
zgc:112416 cssa16h21orf58 coding upstream 46761 19544144 ~ 19546580 (+)
LOC110495758 LOC106575368 coding upstream 122655 19462849 ~ 19470686 (+)
LOC118941117 LOC106574523 coding upstream 132420 19458772 ~ 19460921 (+)
LOC110495755 LOC106574522 coding upstream 148908 19436699 ~ 19444433 (+)
LOC110495754 ola1 coding upstream 158485 19424249 ~ 19434856 (+)
LOC110495766 LOC106574532 coding downstream 61325 19655216 ~ 19669147 (+)
trnak-uuu-124 NA coding downstream 78283 19672174 ~ 19672246 (+)
trnak-uuu-125 NA coding downstream 79413 19673304 ~ 19673376 (+)
trnak-cuu-73 NA coding downstream 82390 19676281 ~ 19676353 (+)
trnan-guu-15 NA coding downstream 83219 19677110 ~ 19677183 (+)
G1523753 LOC106574529 non-coding upstream 16245 19574198 ~ 19577096 (+)
G1523735 LOC106574527 non-coding upstream 44563 19548396 ~ 19548778 (+)
G1523734 NA non-coding upstream 45381 19546597 ~ 19547960 (+)
G1523728 NA non-coding upstream 60337 19531915 ~ 19533004 (+)
G1523726 LOC106574571 non-coding upstream 62690 19530252 ~ 19530651 (+)
G1523765 LOC106575406 non-coding downstream 2745 19596636 ~ 19600290 (+)
G1523783 NA non-coding downstream 37047 19630938 ~ 19631515 (+)
G1523871 NA non-coding downstream 254308 19848199 ~ 19848838 (+)
G1523894 NA non-coding downstream 261835 19855726 ~ 19856055 (+)
G1523896 NA non-coding downstream 264215 19858106 ~ 19858708 (+)
G1523703 LOC106575364 other upstream 86085 19506392 ~ 19507256 (+)
G1523614 NA other upstream 214869 19377067 ~ 19378472 (+)
otomp omp-1 other upstream 386107 19206164 ~ 19211574 (+)
G1523542 NA other upstream 391252 19201027 ~ 19202188 (+)
LOC110495769 LOC106575326 other downstream 156841 19748427 ~ 19761242 (+)
G1523847 NA other downstream 181201 19775092 ~ 19827966 (+)
LOC110495771 LOC106574539 other downstream 303169 19897030 ~ 19900020 (+)
LOC110495777 LOC106574545 other downstream 398949 19992559 ~ 20049054 (+)
LOC110495776 LOC106574545 other downstream 472363 20065965 ~ 20110618 (+)

Expression


Co-expression Network