G1524702


Basic Information

Item Value
gene id G1524702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19667110 ~ 19669050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745791
TGTCAGCTCAGGTATTCTACTACCTCGTTGTTAAACTTGTTCCACTGTGTCCCAGGAGACCTTTTCCATTATTCAGATCCCTTCCTCCACGTCTGCCTTCTATTTTCATCCAGGGTCTGATTCAGATTGGACTCTCTGGCTGGCCACTCAATTACATGAATATATCAATCAATGAAGCGAGCAGCGCTGCAAACCTTTGCCATCTAGAAATTCATACCCAGCTGTAGAGTCTCTGACTGTATCTATTGGAAGCATCTGTCAtctttagcctggtcccagaGTCAGTGTGAACCACAAAAACAAAACAGCTGTAAATCACCATGCATCTCAACCTCAACTCTCTGCCGGTGGCACAAGCCCCGGTTGAAATAAAGTCATGCAAATATGAACTGATCAAAATCAATATACTGACAATGAAAAGTGACATCCTTTGGATTCAATAAAAGTCAATAAAGTGCATTCTTTCTGCCTCAGACAGTTGGGCAGAAAAACATGCAACTTGTCTGATGCTGACTAATCTATCCAGCTATTAGTGTTGATTGAAGGTTCATTTCTGTATAGTTATGGGATGTTTgtgcttaaaggggcaatctgcagttactATACCAATTTTTGGACATGTCCATTTTTGGATATAAACCCATTGATTCTTGGAGAGTATTCGTTATAAATGccccatgagcttagttcaactgtcgtaccccatcagaagcCAAAATATAAACTTGTAAATGTAACAAAAATACTGTATcgtctcaaaacatggttaaaaacgaaatggatggtcagtccttgcatccacagcTCTGTCAATGAATTTGAGTGTGGTTCCATTtttccagccccatccttcaacCTTTTACTGAAACAGTGGAACAGTGGTGAGGGGTGCTTTGTATCATTTCAACTGTGGATTGCCGCTTGAAGCGCTTAAATATGGCACCGAAGAGGCTGAAGTTACACGTTCCAACCAGCCCGGTAAGTTTGCCATCTTTCATTTAAAATATTGTTTGTATGACACAAAATCAATAACTATGACGCGTTTCTTGTATATCCCTATTTATTAACCATCTCCACCTCGATGATATACTGAGAACAGTCCAGCGTCCTGATTTGATTCATACCAGTATGTCTATGCACGCGGTGTATATCGGTTTAGTGCCTGCTTCATGTCTAGGAGGTCTTTGTACAACAAGATCGTACAAAGACCTCTTAGCAGACCAATCTACCGCCCAATCCCCTAGGATTCCTAGTGCCAGTGTAGGTATACTTGAAAGTGCAATAAATATAAACAACACAAAGAGGAAAAAACAAAGAATTAAAAAATGACAAACtactaaatctttttttttttttaaaaaggtacaTTACTGGCAGTTTACACCCACACCTGATTTTCAAATGAATGCAAGAAGAAAAAGTAATTTCTGGATAGAAGTTgcccttaggcacagatctaggatcagcttaccctccctaaatcctaaccttaaccgttaCGGAGAGAAACCATAAAGCTGACCTTATATTAGTGTCTAGGACGCAACTATAAAAGCCGATAAATATGCTACGGGTTCCATGCTGTCAGTTATGATGAAGTCATCAACCACCCGTCACTTGATTGGCTAAAGTGTCATCCAAGGAGGGTGTCAAGAAAAAGTCCTTGTCATCTTCACACGGTTACTCGATTGTTTTTCTCTAGCCTAGAGTGAATAACACGGCATGCTGCTATCCCGCAGGTCTATCCATCTGGGGTCAAAGGTGAAGCCATGGTCGAAAGTTCACAGATGAGCAGGAAGTTCTTCTCTGGTAGGATGAGGATgagggtgggtaggtaggtgggatctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745791 True 1850 lncRNA 0.41 2 19667110 19669050

Neighbor

gene id symbol gene type direction distance location
LOC110497086 LOC106574531 coding downstream 18359 19584834 ~ 19648751 (-)
LOC110495765 NA coding downstream 85876 19578492 ~ 19581234 (-)
LOC110495764 LOC106574529 coding downstream 89977 19573628 ~ 19577133 (-)
LOC110497085 LOC106574572 coding downstream 96415 19562014 ~ 19570695 (-)
LOC110495763 LOC106574527 coding downstream 105887 19546585 ~ 19561223 (-)
trnan-guu-14 NA coding upstream 7609 19676659 ~ 19676732 (-)
LOC110495768 LOC106574536 coding upstream 93424 19762474 ~ 19793454 (-)
LOC118941046 LOC103370040 coding upstream 191154 19860204 ~ 19864234 (-)
LOC110495773 casq1 coding upstream 290430 19959480 ~ 19967828 (-)
LOC110497091 LOC106574544 coding upstream 381390 20050440 ~ 20058151 (-)
G1524679 NA non-coding downstream 94581 19570743 ~ 19572529 (-)
G1524598 NA non-coding downstream 269308 19397331 ~ 19397802 (-)
LOC110495751 LOC106574518 non-coding downstream 289004 19322656 ~ 19384501 (-)
G1524548 NA non-coding downstream 345074 19321833 ~ 19322036 (-)
G1524545 LOC106574515 non-coding downstream 350604 19315112 ~ 19316506 (-)
G1524746 NA non-coding upstream 38634 19707684 ~ 19708154 (-)
G1524769 NA non-coding upstream 73739 19742789 ~ 19745279 (-)
G1524791 NA non-coding upstream 179319 19848369 ~ 19848839 (-)
G1524820 NA non-coding upstream 182024 19851074 ~ 19851287 (-)
G1524823 NA non-coding upstream 184310 19853360 ~ 19853658 (-)
G1524473 LOC106574589 other downstream 502984 19143985 ~ 19164126 (-)
G1524311 NA other downstream 917715 18749125 ~ 18749395 (-)
G1523241 NA other downstream 1099863 18561906 ~ 18567247 (-)
G1523234 NA other downstream 1125399 18541145 ~ 18541711 (-)
G1524755 LOC106581475 other upstream 53695 19722745 ~ 19730068 (-)
LOC110497093 LOC106574562 other upstream 902046 20558557 ~ 20595753 (-)
G1527230 NA other upstream 2593006 22262056 ~ 22262462 (-)
G1528018 NA other upstream 3202995 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 3490508 23008547 ~ 23168591 (-)

Expression


Co-expression Network