Gene
RNA
| Item | Value |
|---|---|
| gene id | G1523896 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19858106 ~ 19858708 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1744897 | True | 603 | lncRNA | 0.28 | 1 | 19858106 | 19858708 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tlr22 | tlr22 | coding | upstream | 10262 | 19844336 ~ 19847844 (+) |
| LOC110495770 | LOC100136121 | coding | upstream | 21227 | 19832923 ~ 19836879 (+) |
| LOC118941119 | LOC100136121 | coding | upstream | 38000 | 19816649 ~ 19820106 (+) |
| LOC118941067 | LOC106593417 | coding | upstream | 45101 | 19812002 ~ 19813005 (+) |
| LOC118941120 | LOC100136121 | coding | upstream | 50135 | 19804510 ~ 19807971 (+) |
| LOC110495771 | LOC106574539 | coding | downstream | 38322 | 19897030 ~ 19900020 (+) |
| LOC110495772 | LOC106574540 | coding | downstream | 49895 | 19908603 ~ 19954099 (+) |
| poglut1 | poglut1 | coding | downstream | 110800 | 19969508 ~ 19975011 (+) |
| timmdc1 | cc001 | coding | downstream | 116306 | 19975014 ~ 19982950 (+) |
| LOC110495777 | LOC106574545 | coding | downstream | 133851 | 19992559 ~ 20049054 (+) |
| G1523894 | NA | non-coding | upstream | 2051 | 19855726 ~ 19856055 (+) |
| G1523871 | NA | non-coding | upstream | 9268 | 19848199 ~ 19848838 (+) |
| G1523783 | NA | non-coding | upstream | 226591 | 19630938 ~ 19631515 (+) |
| G1523765 | LOC106575406 | non-coding | upstream | 257816 | 19596636 ~ 19600290 (+) |
| G1523763 | LOC106574531 | non-coding | upstream | 264215 | 19593341 ~ 19593891 (+) |
| G1523959 | NA | non-coding | downstream | 124517 | 19983225 ~ 19983481 (+) |
| G1523962 | NA | non-coding | downstream | 127014 | 19985722 ~ 19986153 (+) |
| G1523994 | NA | non-coding | downstream | 191194 | 20049902 ~ 20104851 (+) |
| G1523997 | LOC106575314 | non-coding | downstream | 194061 | 20052769 ~ 20118213 (+) |
| G1523847 | NA | other | upstream | 30140 | 19775092 ~ 19827966 (+) |
| LOC110495769 | LOC106575326 | other | upstream | 97086 | 19748427 ~ 19761242 (+) |
| G1523703 | LOC106575364 | other | upstream | 350850 | 19506392 ~ 19507256 (+) |
| LOC110495755 | LOC106574522 | other | upstream | 413797 | 19436699 ~ 19444433 (+) |
| G1523614 | NA | other | upstream | 479634 | 19377067 ~ 19378472 (+) |
| LOC110495776 | LOC106574545 | other | downstream | 207546 | 20065965 ~ 20110618 (+) |
| LOC110495784 | LOC106574551 | other | downstream | 347784 | 20206484 ~ 20236753 (+) |
| G1524124 | LOC106574554 | other | downstream | 446997 | 20305705 ~ 20306904 (+) |
