Gene
RNA
| Item | Value |
|---|---|
| gene id | G1524860 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19917375 ~ 19917756 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1745976 | True | 354 | lncRNA | 0.58 | 2 | 19917375 | 19917756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941046 | LOC103370040 | coding | downstream | 53141 | 19860204 ~ 19864234 (-) |
| LOC110495768 | LOC106574536 | coding | downstream | 123921 | 19762474 ~ 19793454 (-) |
| trnan-guu-14 | NA | coding | downstream | 240643 | 19676659 ~ 19676732 (-) |
| LOC110497086 | LOC106574531 | coding | downstream | 268624 | 19584834 ~ 19648751 (-) |
| LOC110495765 | NA | coding | downstream | 336141 | 19578492 ~ 19581234 (-) |
| LOC110495773 | casq1 | coding | upstream | 41724 | 19959480 ~ 19967828 (-) |
| LOC110497091 | LOC106574544 | coding | upstream | 132684 | 20050440 ~ 20058151 (-) |
| LOC110495778 | LOC106575314 | coding | upstream | 195550 | 20113306 ~ 20140842 (-) |
| LOC110495781 | LOC106574547 | coding | upstream | 260845 | 20178601 ~ 20192178 (-) |
| LOC110495785 | LOC106574553 | coding | upstream | 322156 | 20239912 ~ 20248333 (-) |
| G1524838 | NA | non-coding | downstream | 36512 | 19880614 ~ 19880863 (-) |
| G1524831 | NA | non-coding | downstream | 51459 | 19865652 ~ 19865916 (-) |
| G1524824 | NA | non-coding | downstream | 63175 | 19853920 ~ 19854200 (-) |
| G1524823 | NA | non-coding | downstream | 63717 | 19853360 ~ 19853658 (-) |
| G1524820 | NA | non-coding | downstream | 66088 | 19851074 ~ 19851287 (-) |
| G1524893 | NA | non-coding | upstream | 55379 | 19973135 ~ 19974915 (-) |
| G1524900 | NA | non-coding | upstream | 65887 | 19983643 ~ 19984222 (-) |
| G1524985 | LOC106574545 | non-coding | upstream | 185547 | 20103303 ~ 20104396 (-) |
| G1525012 | NA | non-coding | upstream | 249890 | 20167646 ~ 20167871 (-) |
| G1524755 | LOC106581475 | other | downstream | 187307 | 19722745 ~ 19730068 (-) |
| LOC110495764 | LOC106574529 | other | downstream | 340275 | 19573628 ~ 19577133 (-) |
| G1524473 | LOC106574589 | other | downstream | 753249 | 19143985 ~ 19164126 (-) |
| G1524311 | NA | other | downstream | 1167980 | 18749125 ~ 18749395 (-) |
| G1523241 | NA | other | downstream | 1350128 | 18561906 ~ 18567247 (-) |
| LOC110497093 | LOC106574562 | other | upstream | 653340 | 20558557 ~ 20595753 (-) |
| G1527230 | NA | other | upstream | 2344300 | 22262056 ~ 22262462 (-) |
| G1528018 | NA | other | upstream | 2954289 | 22872045 ~ 22885833 (-) |
| LOC110495841 | LOC106574435 | other | upstream | 3241802 | 23008547 ~ 23168591 (-) |
| LOC110495851 | LOC106574449 | other | upstream | 3563784 | 23479558 ~ 23541681 (-) |
