G1524900


Basic Information

Item Value
gene id G1524900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19983643 ~ 19984222 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746016
GCCCTGAAAATAAATTCCATACATTCCTAATGCCATTCAAATgaaattatttacattttaactGTAGGCTAGCCTTCAGCTGGGAGGTGAAGAGGAATGCATTTCTTTAGTAATAGCTCCCTGGAACAAAAGGAGACACTATTGCattacatttcaacaaaaactaATTTGCATAATAATGCTTACGTCACTTGTTGATCTGAGCAGACTCTCTCCAATAGGACATGAAATGTAATTCATTCAGATGATTACTGAAATGAATTACACAATCATAACTTAATGACACACTAAACCACATGGCTGTAACCCGATCGTCACTGACCAAACCTTTAAAGTAGAATTAGaatgttagctgtgttgttaacTAACGACTTGTCTCTCTTTCCAATCTCCTGGCTATTTGTTGTCAATCTGAGTCGCGTTCCGAGCCCCAGCTGTTAGTGTGCCACATCTTGTTTACAGCAGGGGCAGAGGCTATGTTTGACCTAGTTGCTGCTGACAAGCCCAGGGGCCTAAAGACagacatggaaacacacacagattgTAATTCAATGTTCATGTTTCTAGACACACGCCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746016 True 580 lncRNA 0.40 1 19983643 19984222

Neighbor

gene id symbol gene type direction distance location
LOC110495773 casq1 coding downstream 15815 19959480 ~ 19967828 (-)
LOC118941046 LOC103370040 coding downstream 119409 19860204 ~ 19864234 (-)
LOC110495768 LOC106574536 coding downstream 190189 19762474 ~ 19793454 (-)
trnan-guu-14 NA coding downstream 306911 19676659 ~ 19676732 (-)
LOC110497086 LOC106574531 coding downstream 334892 19584834 ~ 19648751 (-)
LOC110497091 LOC106574544 coding upstream 66218 20050440 ~ 20058151 (-)
LOC110495778 LOC106575314 coding upstream 129084 20113306 ~ 20140842 (-)
LOC110495781 LOC106574547 coding upstream 194379 20178601 ~ 20192178 (-)
LOC110495785 LOC106574553 coding upstream 255690 20239912 ~ 20248333 (-)
LOC110495786 LOC106574549 coding upstream 267052 20251274 ~ 20255220 (-)
G1524893 NA non-coding downstream 8728 19973135 ~ 19974915 (-)
G1524860 NA non-coding downstream 65887 19917375 ~ 19917756 (-)
G1524838 NA non-coding downstream 102780 19880614 ~ 19880863 (-)
G1524831 NA non-coding downstream 117727 19865652 ~ 19865916 (-)
G1524824 NA non-coding downstream 129443 19853920 ~ 19854200 (-)
G1524985 LOC106574545 non-coding upstream 119081 20103303 ~ 20104396 (-)
G1525012 NA non-coding upstream 183424 20167646 ~ 20167871 (-)
G1525022 NA non-coding upstream 211587 20195809 ~ 20196014 (-)
G1525057 NA non-coding upstream 266185 20250407 ~ 20250654 (-)
G1524755 LOC106581475 other downstream 253575 19722745 ~ 19730068 (-)
LOC110495764 LOC106574529 other downstream 406543 19573628 ~ 19577133 (-)
G1524473 LOC106574589 other downstream 819517 19143985 ~ 19164126 (-)
G1524311 NA other downstream 1234248 18749125 ~ 18749395 (-)
G1523241 NA other downstream 1416396 18561906 ~ 18567247 (-)
LOC110497093 LOC106574562 other upstream 586874 20558557 ~ 20595753 (-)
G1527230 NA other upstream 2277834 22262056 ~ 22262462 (-)
G1528018 NA other upstream 2887823 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 3175336 23008547 ~ 23168591 (-)
LOC110495851 LOC106574449 other upstream 3497318 23479558 ~ 23541681 (-)

Expression


Co-expression Network