Gene
RNA
| Item | Value |
|---|---|
| gene id | G1523962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19985722 ~ 19986153 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1744964 | True | 432 | lncRNA | 0.43 | 1 | 19985722 | 19986153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| timmdc1 | cc001 | coding | upstream | 2772 | 19975014 ~ 19982950 (+) |
| poglut1 | poglut1 | coding | upstream | 10711 | 19969508 ~ 19975011 (+) |
| LOC110495772 | LOC106574540 | coding | upstream | 31623 | 19908603 ~ 19954099 (+) |
| LOC110495771 | LOC106574539 | coding | upstream | 85702 | 19897030 ~ 19900020 (+) |
| tlr22 | tlr22 | coding | upstream | 137878 | 19844336 ~ 19847844 (+) |
| LOC110495777 | LOC106574545 | coding | downstream | 6406 | 19992559 ~ 20049054 (+) |
| LOC110495776 | LOC106574545 | coding | downstream | 79812 | 20065965 ~ 20110618 (+) |
| LOC110495779 | LOC106575341 | coding | downstream | 176632 | 20162785 ~ 20164464 (+) |
| si:busm1-52i16.2 | LOC106574552 | coding | downstream | 181080 | 20167233 ~ 20170345 (+) |
| LOC110495784 | LOC106574551 | coding | downstream | 220331 | 20206484 ~ 20236753 (+) |
| G1523959 | NA | non-coding | upstream | 2241 | 19983225 ~ 19983481 (+) |
| G1523896 | NA | non-coding | upstream | 127014 | 19858106 ~ 19858708 (+) |
| G1523894 | NA | non-coding | upstream | 129667 | 19855726 ~ 19856055 (+) |
| G1523871 | NA | non-coding | upstream | 136884 | 19848199 ~ 19848838 (+) |
| G1523994 | NA | non-coding | downstream | 63749 | 20049902 ~ 20104851 (+) |
| G1523997 | LOC106575314 | non-coding | downstream | 66616 | 20052769 ~ 20118213 (+) |
| G1524032 | NA | non-coding | downstream | 137695 | 20123848 ~ 20124587 (+) |
| G1524034 | LOC106575314 | non-coding | downstream | 138915 | 20125068 ~ 20126928 (+) |
| G1524059 | NA | non-coding | downstream | 206182 | 20192335 ~ 20192563 (+) |
| G1523847 | NA | other | upstream | 157756 | 19775092 ~ 19827966 (+) |
| LOC110495769 | LOC106575326 | other | upstream | 224702 | 19748427 ~ 19761242 (+) |
| G1523703 | LOC106575364 | other | upstream | 478466 | 19506392 ~ 19507256 (+) |
| LOC110495755 | LOC106574522 | other | upstream | 541413 | 19436699 ~ 19444433 (+) |
| G1524124 | LOC106574554 | other | downstream | 319552 | 20305705 ~ 20306904 (+) |
| G1524181 | LOC106574559 | other | downstream | 487207 | 20473360 ~ 20483713 (+) |
