G1524034 (LOC106575314)


Basic Information

Item Value
gene id G1524034
gene name LOC106575314
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20125068 ~ 20126928 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745041
CCCTCTTGAGGGCGCAGGCTCTCAGGACCTTCTCATACTTCTGAGGATGGAGCTCTTTGCCAAACAGGATGTTGCTGCGGATGGTTCCAGGGAACACCCAGGGCTGCTGGGAGGCGTAGGTCAGCTGACCTTTGACCTTCAACACCCCCTTGTCGTGAGGCAGCTCCCCCAGGATGGAGCTGAGCAGAGAGGACTGTGGGAAATGTGAAGGGGGAACAGGCGAGCTTGATAAGaagaacatacactgagtgtacaaaacattaggaacaccttcccaatatggagttggatttaacaagtgacatcaataaggcatCATAGCATTGACCTgaattcacctggccagtctgtcatggaaagagcaggaattcataatgctttgtacactcaaGTGTACACAAAGGCAGGCACTATGTCACAGTAAGAGGAGAAAACCTCAATGTTTACACATCCTGCAAAaccGGTATCTGATTCACACTGTAGCTAAATAAATATTCCAGTTGGCTTACTTCCCCGCTACGTTGGCGGTCCTCATACAGTGATGCAATAAGCTGCCACACCAAGCTAAGAaacatgacctctgacctttccAGCCCCCACAGGACCAATGACGGCGACGAGCTGCTCTGACTTTACTGTGAGTGACAGGTTCTGGAGAGACGGGGCGTCCTGACTCtgtacagagcgagagaggggtcaTTTCAGGTTATACTTTATTATAAAAGAGTGAGCACCAAAATGCATAAATATACAAATGCTAACCTGCCTTGTTATTGTAATggagagaggttagcatgtcttgggggggtATGAGCTACCTTTCTCACAAatcattcaggactatccataatcatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745041 True 855 lncRNA 0.48 2 20125068 20126928

Neighbor

gene id symbol gene type direction distance location
LOC110495776 LOC106574545 coding upstream 14450 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 coding upstream 76014 19992559 ~ 20049054 (+)
timmdc1 cc001 coding upstream 142118 19975014 ~ 19982950 (+)
poglut1 poglut1 coding upstream 150057 19969508 ~ 19975011 (+)
LOC110495772 LOC106574540 coding upstream 170969 19908603 ~ 19954099 (+)
LOC110495779 LOC106575341 coding downstream 35857 20162785 ~ 20164464 (+)
si:busm1-52i16.2 LOC106574552 coding downstream 40305 20167233 ~ 20170345 (+)
LOC110495784 LOC106574551 coding downstream 79556 20206484 ~ 20236753 (+)
LOC110497092 NA coding downstream 117426 20244354 ~ 20245888 (+)
LOC110495788 LOC106574550 coding downstream 169089 20296017 ~ 20302100 (+)
G1524032 NA non-coding upstream 481 20123848 ~ 20124587 (+)
G1523997 LOC106575314 non-coding upstream 6855 20052769 ~ 20118213 (+)
G1523994 NA non-coding upstream 20217 20049902 ~ 20104851 (+)
G1523962 NA non-coding upstream 138915 19985722 ~ 19986153 (+)
G1523959 NA non-coding upstream 141587 19983225 ~ 19983481 (+)
G1524059 NA non-coding downstream 65407 20192335 ~ 20192563 (+)
G1524069 NA non-coding downstream 84337 20211265 ~ 20212004 (+)
G1524092 NA non-coding downstream 123350 20250278 ~ 20250488 (+)
G1524097 NA non-coding downstream 132259 20259187 ~ 20260077 (+)
LOC110495771 LOC106574539 other upstream 225049 19897030 ~ 19900020 (+)
G1523847 NA other upstream 297102 19775092 ~ 19827966 (+)
LOC110495769 LOC106575326 other upstream 364048 19748427 ~ 19761242 (+)
G1524124 LOC106574554 other downstream 178777 20305705 ~ 20306904 (+)
G1524181 LOC106574559 other downstream 346432 20473360 ~ 20483713 (+)
G1525320 NA other downstream 629763 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 2472485 22599016 ~ 22641368 (+)

Expression


Co-expression Network