Gene
RNA
| Item | Value |
|---|---|
| gene id | G1525022 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20195809 ~ 20196014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1746159 | True | 206 | lncRNA | 0.41 | 1 | 20195809 | 20196014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495781 | LOC106574547 | coding | downstream | 3631 | 20178601 ~ 20192178 (-) |
| LOC110495778 | LOC106575314 | coding | downstream | 54967 | 20113306 ~ 20140842 (-) |
| LOC110497091 | LOC106574544 | coding | downstream | 137658 | 20050440 ~ 20058151 (-) |
| LOC110495773 | casq1 | coding | downstream | 227981 | 19959480 ~ 19967828 (-) |
| LOC118941046 | LOC103370040 | coding | downstream | 331575 | 19860204 ~ 19864234 (-) |
| LOC110495785 | LOC106574553 | coding | upstream | 43898 | 20239912 ~ 20248333 (-) |
| LOC110495786 | LOC106574549 | coding | upstream | 55260 | 20251274 ~ 20255220 (-) |
| LOC110495787 | LOC106574546 | coding | upstream | 63153 | 20259167 ~ 20290820 (-) |
| LOC110495789 | LOC106574554 | coding | upstream | 108673 | 20304687 ~ 20309450 (-) |
| LOC110495790 | LOC106574555 | coding | upstream | 155474 | 20351488 ~ 20462793 (-) |
| G1525012 | NA | non-coding | downstream | 27938 | 20167646 ~ 20167871 (-) |
| G1524985 | LOC106574545 | non-coding | downstream | 91413 | 20103303 ~ 20104396 (-) |
| G1524900 | NA | non-coding | downstream | 211587 | 19983643 ~ 19984222 (-) |
| G1524893 | NA | non-coding | downstream | 220894 | 19973135 ~ 19974915 (-) |
| G1525057 | NA | non-coding | upstream | 54393 | 20250407 ~ 20250654 (-) |
| G1525059 | NA | non-coding | upstream | 70153 | 20266167 ~ 20266455 (-) |
| G1525060 | NA | non-coding | upstream | 71233 | 20267247 ~ 20267735 (-) |
| G1525035 | LOC101478692 | non-coding | upstream | 104542 | 20300556 ~ 20301395 (-) |
| G1525105 | NA | non-coding | upstream | 331704 | 20527718 ~ 20528164 (-) |
| G1524755 | LOC106581475 | other | downstream | 465741 | 19722745 ~ 19730068 (-) |
| LOC110495764 | LOC106574529 | other | downstream | 618709 | 19573628 ~ 19577133 (-) |
| G1524473 | LOC106574589 | other | downstream | 1031683 | 19143985 ~ 19164126 (-) |
| G1524311 | NA | other | downstream | 1446414 | 18749125 ~ 18749395 (-) |
| G1523241 | NA | other | downstream | 1628562 | 18561906 ~ 18567247 (-) |
| LOC110497093 | LOC106574562 | other | upstream | 375082 | 20558557 ~ 20595753 (-) |
| G1527230 | NA | other | upstream | 2066042 | 22262056 ~ 22262462 (-) |
| G1528018 | NA | other | upstream | 2676031 | 22872045 ~ 22885833 (-) |
| LOC110495841 | LOC106574435 | other | upstream | 2963544 | 23008547 ~ 23168591 (-) |
| LOC110495851 | LOC106574449 | other | upstream | 3285526 | 23479558 ~ 23541681 (-) |
