G1524069


Basic Information

Item Value
gene id G1524069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20211265 ~ 20212004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745101
TCATCATCTGGAGGTAGATTAAGGAGCAGATCCCGATTTATACACAAACTTGTCGCTCTTCATGTGTATGTATAGCACATCACTAAAGACCCGAATACAAGCCTGTTGTTCATGTGTATGTATAGCACATCACTAAAGTCCCGAATACAAGCCTGTTGTTCATGTGTATGTATAGCACATCACTAAAGTCCCGAATACAAGCCTGTTGTTCATGTGTATGTATAGCACATCACTAAAGTCCCGAATACAAGCCTGTTGTTCATGTGTATGTATAGCACATCACTAAAGTCCCGAATACAAGCCTGTTGTTCATGTGTATGTATAGCACATCACTAAAGTCCCGAATACAAGCATGTTTCTACTTgttcctttcccctctctttttctgtcttatcatgaagtgttttgagtaCACAGGTTTCACGACAGAGATTCTGTGTGCGTGGTATTACagtaacagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745101 True 537 lncRNA 0.42 2 20211265 20212004

Neighbor

gene id symbol gene type direction distance location
si:busm1-52i16.2 LOC106574552 coding upstream 40920 20167233 ~ 20170345 (+)
LOC110495779 LOC106575341 coding upstream 46801 20162785 ~ 20164464 (+)
LOC110495776 LOC106574545 coding upstream 100647 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 coding upstream 162211 19992559 ~ 20049054 (+)
timmdc1 cc001 coding upstream 228315 19975014 ~ 19982950 (+)
LOC110497092 NA coding downstream 32350 20244354 ~ 20245888 (+)
LOC110495788 LOC106574550 coding downstream 84013 20296017 ~ 20302100 (+)
LOC110495791 LOC106575306 coding downstream 101533 20312098 ~ 20328610 (+)
LOC110495794 LOC106574560 coding downstream 315675 20527679 ~ 20552117 (+)
LOC110495795 LOC106574563 coding downstream 392882 20604886 ~ 20614129 (+)
G1524059 NA non-coding upstream 18702 20192335 ~ 20192563 (+)
G1524034 LOC106575314 non-coding upstream 84337 20125068 ~ 20126928 (+)
G1524032 NA non-coding upstream 86678 20123848 ~ 20124587 (+)
G1523997 LOC106575314 non-coding upstream 93052 20052769 ~ 20118213 (+)
G1523994 NA non-coding upstream 106414 20049902 ~ 20104851 (+)
LOC110495784 LOC106574551 non-coding downstream 23473 20206484 ~ 20236753 (+)
G1524092 NA non-coding downstream 38274 20250278 ~ 20250488 (+)
G1524097 NA non-coding downstream 47183 20259187 ~ 20260077 (+)
G1524098 LOC106574546 non-coding downstream 48700 20260704 ~ 20260919 (+)
G1524099 NA non-coding downstream 49427 20261431 ~ 20261658 (+)
LOC110495771 LOC106574539 other upstream 311246 19897030 ~ 19900020 (+)
G1523847 NA other upstream 383299 19775092 ~ 19827966 (+)
LOC110495769 LOC106575326 other upstream 450245 19748427 ~ 19761242 (+)
G1524124 LOC106574554 other downstream 93701 20305705 ~ 20306904 (+)
G1524181 LOC106574559 other downstream 261356 20473360 ~ 20483713 (+)
G1525320 NA other downstream 544687 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 2387409 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2946829 23158833 ~ 23161291 (+)

Expression


Co-expression Network