G1524125


Basic Information

Item Value
gene id G1524125
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20308487 ~ 20308953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745163
caagtaggattgtACTGGGGGACTCACTTtttcttgagtcattttctattaagccCCACCCACCATTCCTCAGTGTACCAAACAAAGTTCTTGGCCCATCACAGCAAGTTACAGAAATATGCACATTACACAATATGCCGTTAGACATACATCAAGTGGAATGATAGGATCTGCCTTTTACAGTTCATCAGTAATATGCGTCTTGTAACAGTAGCTTATAGTAATAACGTTATTGTAGCTATACAGTCCGTAGCTGGAACAGAACAAGGATCAACAGTTATTATGTGCCTGTTTCAACGTGTACTCTCTTGTGCAGTTGCTCTTTGTAAATTATCCACTACAAAATGAGCCAATCTCTTGCCAAAATGTCCTTAAAACCACAACTAACAAATACTATTGAACATGTGGTTCAAATAAACTGGAAGGAATCTGTGCAACACTCCTGCATTTCTATTTGAGTGTAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745163 True 467 lncRNA 0.38 1 20308487 20308953

Neighbor

gene id symbol gene type direction distance location
LOC110495788 LOC106574550 coding upstream 6387 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 62599 20244354 ~ 20245888 (+)
LOC110495784 LOC106574551 coding upstream 71734 20206484 ~ 20236753 (+)
si:busm1-52i16.2 LOC106574552 coding upstream 138142 20167233 ~ 20170345 (+)
LOC110495779 LOC106575341 coding upstream 144023 20162785 ~ 20164464 (+)
LOC110495791 LOC106575306 coding downstream 4584 20312098 ~ 20328610 (+)
LOC110495794 LOC106574560 coding downstream 218726 20527679 ~ 20552117 (+)
LOC110495795 LOC106574563 coding downstream 295933 20604886 ~ 20614129 (+)
LOC110495797 LOC106574564 coding downstream 354458 20663411 ~ 20696331 (+)
LOC110495798 LOC106575297 coding downstream 477116 20786069 ~ 20855643 (+)
G1524124 LOC106574554 non-coding upstream 2124 20305705 ~ 20306904 (+)
G1524122 NA non-coding upstream 4020 20304224 ~ 20304467 (+)
G1524117 NA non-coding upstream 17661 20290510 ~ 20290826 (+)
G1524115 LOC106574546 non-coding upstream 19699 20288225 ~ 20288788 (+)
G1524101 NA non-coding upstream 40725 20267184 ~ 20267762 (+)
G1524105 NA non-coding downstream 22871 20331824 ~ 20333289 (+)
G1524129 NA non-coding downstream 30561 20339514 ~ 20339810 (+)
G1524130 NA non-coding downstream 30928 20339881 ~ 20340281 (+)
G1524131 NA non-coding downstream 31400 20340353 ~ 20340612 (+)
LOC110495776 LOC106574545 other upstream 232175 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 274842 19992559 ~ 20049054 (+)
LOC110495771 LOC106574539 other upstream 408468 19897030 ~ 19900020 (+)
G1524181 LOC106574559 other downstream 164407 20473360 ~ 20483713 (+)
G1525320 NA other downstream 447738 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 2290460 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2849880 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 4211782 24520697 ~ 24525649 (+)

Expression


Co-expression Network