G1524182


Basic Information

Item Value
gene id G1524182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20499006 ~ 20526613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745225
TCTGGGTTCTTCGATTGACTGAATGTGGGATTTTAGTCCCTCACACTTCAAGCTTTGTCAACAGCAGTACAGCAGTAAACACCATGTAGCTGAACACTCCATTCTGTAAATCTCgaaccactcctctcctcaggaacGAGCTACCAGCCTCCCACTGGATCGTGATACCATTTCTGTTGACGTCTCCCGTTTTTTGAATAACACATTTCCATTTCTGAAGAGGAATGGGGTCAGAGAAGACACAGACAGGAGGCCATTTCCCAGGGATACTAGTTAGCCAGATCCTATCCTCCATATGTTCCCGTTGGCCCTGCCACAGATTCCCCGTCAGCCTTCCCATCCAGCCTGGGGAATTACTTCCCCTTACGCTCCCCTTGACAGACTGACATCATTAATAAGCCGGATGGAATAGTTTAACGAGGGACTTCCCAGAAACCAGACCGAAGAGACAGATTGCAACATAGACAGgacctgagccctaggaccatgccccaggaatacctaacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactattctgccttattattattcgaccatgttggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacccggcacagccagaagaggactggccaccccacatagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745225 True 684 lncRNA 0.48 4 20499006 20526613

Neighbor

gene id symbol gene type direction distance location
LOC110495791 LOC106575306 coding upstream 170396 20312098 ~ 20328610 (+)
LOC110495788 LOC106574550 coding upstream 196906 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 253118 20244354 ~ 20245888 (+)
LOC110495784 LOC106574551 coding upstream 262253 20206484 ~ 20236753 (+)
si:busm1-52i16.2 LOC106574552 coding upstream 328661 20167233 ~ 20170345 (+)
LOC110495794 LOC106574560 coding downstream 1066 20527679 ~ 20552117 (+)
LOC110495795 LOC106574563 coding downstream 78273 20604886 ~ 20614129 (+)
LOC110495797 LOC106574564 coding downstream 136798 20663411 ~ 20696331 (+)
LOC110495798 LOC106575297 coding downstream 259456 20786069 ~ 20855643 (+)
LOC110497094 LOC106575296 coding downstream 345887 20872500 ~ 20885233 (+)
G1524154 NA non-coding upstream 128407 20370071 ~ 20370599 (+)
G1524137 NA non-coding upstream 152965 20345663 ~ 20346041 (+)
G1524136 NA non-coding upstream 153497 20345074 ~ 20345509 (+)
G1524135 NA non-coding upstream 153999 20344792 ~ 20345007 (+)
G1524134 NA non-coding upstream 154520 20344192 ~ 20344486 (+)
G1524179 NA non-coding downstream 27233 20553846 ~ 20554995 (+)
G1524241 LOC106574562 non-coding downstream 31266 20557879 ~ 20560856 (+)
G1524242 LOC106574562 non-coding downstream 34880 20561493 ~ 20562121 (+)
G1524272 LOC106579309 non-coding downstream 73524 20600137 ~ 20600848 (+)
G1524276 NA non-coding downstream 87602 20614215 ~ 20614829 (+)
G1524181 LOC106574559 other upstream 15293 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 192102 20305705 ~ 20306904 (+)
LOC110495776 LOC106574545 other upstream 422694 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 465361 19992559 ~ 20049054 (+)
G1525320 NA other downstream 230078 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 2072800 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2632220 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3994122 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4478148 25004761 ~ 25005609 (+)

Expression


Co-expression Network