G1524179


Basic Information

Item Value
gene id G1524179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20553846 ~ 20554995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745222
ATTAGATTGGACAGTTAGATTGGACAATCCTCCAAGATACTGTAGTTAGAGCCACAGACTTATAATCATCTCTAGTCTTACCACTACATTTAGGTCCATTTTCAATTGGACCATGAAACTTGGAAAATGTACGTCGTTTGAAATCGTTTTATACATCTTGCTTAATTTCATGAGACAAGCTATATTTTCAGTGCTGCTATTATGATTTGTTACCAAGCTTTATTGTCACAGGCACAGGACACAGCAGGTGTAAAACAGTGCAGGGAGAACCTTAACTTGCCAGCTCTTTCCCAAAAATGCGTAATAACGGTTGTAATACAGATAAATAAAAACAGGTGAAATGTGACAGAAGATGAACAGAAGAACAGAGTTCTATAACGTTcttatatacaggtcagtacagtACCAGTACTGTTATTACAGTGTAGAGGGGTACTGGACGGATTGAGGAAGGAATGAACCTACTCCATCACAACATGTTCTTTGTCTCTActctcttttctctatgTATCCAGTCTCTTCATCTATCCCCTTTATGGTtctcctcgctctctttctcactctctcacgctctcttgctctcatgacctctctctcctctcgcccaTCCTGTGACATCATATCACGTCACCACAATGAGGTGGTGTGTAGCGTAAGGGTGCCAAAGCATTCATGTTCAGGTGATCTATCGTGAAGTAAGCTACCAGTCTGTACCAGTCTCTGCTATTCTGCTGTAGATATGATTTGGTAGTCTATATTGTGGTCAGTGTGAAAATGGGTATTTATTGTGGTTTATTCCCGCAGCAGTCTGTTGGGTCATGAAGGCCTTGAAGTGCACAGAGCTCATGTTGTTTttggctttgtcccaaatggcaccttattccctttatagtgcacttcttttgaacaAGGAAGTAGTACCATTATAGGgtatttgggacacagacttcCTGTTCGGTTTAGTTTTGTTCCAGAATGTCTCTTTGTTTATCAAGACTGTCTAGAACTGGGGGCCAAAAATAGattttctctgtttgtctcttcTTTTTTGCACCAACATTTGTTCCTTTTTTCACAAACATCCGACTTTGAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745222 True 1096 lncRNA 0.40 2 20553846 20554995

Neighbor

gene id symbol gene type direction distance location
LOC110495794 LOC106574560 coding upstream 1729 20527679 ~ 20552117 (+)
LOC110495791 LOC106575306 coding upstream 225236 20312098 ~ 20328610 (+)
LOC110495788 LOC106574550 coding upstream 251746 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 307958 20244354 ~ 20245888 (+)
LOC110495784 LOC106574551 coding upstream 317093 20206484 ~ 20236753 (+)
LOC110495795 LOC106574563 coding downstream 49891 20604886 ~ 20614129 (+)
LOC110495797 LOC106574564 coding downstream 108416 20663411 ~ 20696331 (+)
LOC110495798 LOC106575297 coding downstream 231074 20786069 ~ 20855643 (+)
LOC110497094 LOC106575296 coding downstream 317505 20872500 ~ 20885233 (+)
gcg1 gcg1 coding downstream 332456 20887451 ~ 20890292 (+)
G1524182 NA non-coding upstream 27233 20499006 ~ 20526613 (+)
G1524154 NA non-coding upstream 183247 20370071 ~ 20370599 (+)
G1524137 NA non-coding upstream 207805 20345663 ~ 20346041 (+)
G1524136 NA non-coding upstream 208337 20345074 ~ 20345509 (+)
G1524135 NA non-coding upstream 208839 20344792 ~ 20345007 (+)
G1524241 LOC106574562 non-coding downstream 2884 20557879 ~ 20560856 (+)
G1524242 LOC106574562 non-coding downstream 6498 20561493 ~ 20562121 (+)
G1524272 LOC106579309 non-coding downstream 45142 20600137 ~ 20600848 (+)
G1524276 NA non-coding downstream 59220 20614215 ~ 20614829 (+)
G1525178 NA non-coding downstream 84554 20639549 ~ 20639831 (+)
G1524181 LOC106574559 other upstream 70133 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 246942 20305705 ~ 20306904 (+)
LOC110495776 LOC106574545 other upstream 477534 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 520201 19992559 ~ 20049054 (+)
G1525320 NA other downstream 201696 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 2044418 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2603838 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3965740 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4449766 25004761 ~ 25005609 (+)

Expression


Co-expression Network