G1524276


Basic Information

Item Value
gene id G1524276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20614215 ~ 20614829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1745321
ATGGGATATACATTTTTGTACATGGAGTTTCCTGTTGGCTCATTTGTGTTGAAATGTGCCAAAACCGAGATTAAATCATATGTAATCTCTCATTTTATtttgataatttttttttttctgtcaatTTCCTTCTACGTATCACACCTTTTCTGAGTGAATAATTTTTTCCCAGACATCATTACTATATAATATAAAAATGATCAACCATAATCAACTAAGGTGTGTTGCTTTTTTTTGCCACTGGAGAGCAGGAGCACACTTCACAAATAAGTAATGTACAGAACCTCTGAGTGAGCTGTTTTGTGATCCACACTTGATAAATTAATAGCATTGACATATCCCGATATTTAAGAAGAGCATCAATTATACATTTTCTTTGTCTTTACTggttatacttttttttttttaaatgcattagTGTGTTTCAGTTCAAGCCTTGTTTTTATTGTCCATAATTGAGTTATGGTTGGTATTTGACAAGGATATTCTACCGGGAGCTATGTGTAGAACGTTGATGGAAGATAATGCACATGATGTGAAAAATAATGTCCTTGTTATGCATTCTATGTTGTTCAGAGTGCAACACTACAGAATAAACTGAGAATATACAGTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1745321 True 615 lncRNA 0.32 1 20614215 20614829

Neighbor

gene id symbol gene type direction distance location
LOC110495795 LOC106574563 coding upstream 86 20604886 ~ 20614129 (+)
LOC110495794 LOC106574560 coding upstream 62098 20527679 ~ 20552117 (+)
LOC110495791 LOC106575306 coding upstream 285605 20312098 ~ 20328610 (+)
LOC110495788 LOC106574550 coding upstream 312115 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 368327 20244354 ~ 20245888 (+)
LOC110495797 LOC106574564 coding downstream 48582 20663411 ~ 20696331 (+)
LOC110495798 LOC106575297 coding downstream 171240 20786069 ~ 20855643 (+)
LOC110497094 LOC106575296 coding downstream 257671 20872500 ~ 20885233 (+)
gcg1 gcg1 coding downstream 272622 20887451 ~ 20890292 (+)
LOC118941068 adcy10 coding downstream 275880 20890709 ~ 20900107 (+)
G1524272 LOC106579309 non-coding upstream 13367 20600137 ~ 20600848 (+)
G1524242 LOC106574562 non-coding upstream 52094 20561493 ~ 20562121 (+)
G1524241 LOC106574562 non-coding upstream 53359 20557879 ~ 20560856 (+)
G1524179 NA non-coding upstream 59220 20553846 ~ 20554995 (+)
G1524182 NA non-coding upstream 87602 20499006 ~ 20526613 (+)
G1525178 NA non-coding downstream 24720 20639549 ~ 20639831 (+)
G1525182 NA non-coding downstream 27674 20642503 ~ 20642820 (+)
G1525190 NA non-coding downstream 32241 20647070 ~ 20647390 (+)
G1525211 NA non-coding downstream 47869 20662698 ~ 20662981 (+)
G1525223 NA non-coding downstream 55800 20670629 ~ 20670878 (+)
G1524181 LOC106574559 other upstream 130502 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 307311 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 379035 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 537903 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 580570 19992559 ~ 20049054 (+)
G1525320 NA other downstream 141862 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 1984584 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2544004 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3905906 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4389932 25004761 ~ 25005609 (+)

Expression


Co-expression Network