G1525178


Basic Information

Item Value
gene id G1525178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20639549 ~ 20639831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746340
ctatgaacactaaggtaacctgcctaaacgactactgacccgtagccaGGAAGtgctgtagccatgaagtgccttgaaaggctggtcatggctcacatcaacaccatcatcccagaaaccctagacccactccatttgcataccaccccaacagatccacagatgatgcaatctccattgcactccacacagctcagcattcaacaccatagtgacctcAAAGCTCACCAatactgggactaaacacctccctctgcaactggatccttgacttcctgacggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746340 True 283 lncRNA 0.50 1 20639549 20639831

Neighbor

gene id symbol gene type direction distance location
LOC110495795 LOC106574563 coding upstream 25420 20604886 ~ 20614129 (+)
LOC110495794 LOC106574560 coding upstream 87432 20527679 ~ 20552117 (+)
LOC110495791 LOC106575306 coding upstream 310939 20312098 ~ 20328610 (+)
LOC110495788 LOC106574550 coding upstream 337449 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 393661 20244354 ~ 20245888 (+)
LOC110495797 LOC106574564 coding downstream 23580 20663411 ~ 20696331 (+)
LOC110495798 LOC106575297 coding downstream 146238 20786069 ~ 20855643 (+)
LOC110497094 LOC106575296 coding downstream 232669 20872500 ~ 20885233 (+)
gcg1 gcg1 coding downstream 247620 20887451 ~ 20890292 (+)
LOC118941068 adcy10 coding downstream 250878 20890709 ~ 20900107 (+)
G1524276 NA non-coding upstream 24720 20614215 ~ 20614829 (+)
G1524272 LOC106579309 non-coding upstream 38701 20600137 ~ 20600848 (+)
G1524242 LOC106574562 non-coding upstream 77428 20561493 ~ 20562121 (+)
G1524241 LOC106574562 non-coding upstream 78693 20557879 ~ 20560856 (+)
G1524179 NA non-coding upstream 84554 20553846 ~ 20554995 (+)
G1525182 NA non-coding downstream 2672 20642503 ~ 20642820 (+)
G1525190 NA non-coding downstream 7239 20647070 ~ 20647390 (+)
G1525211 NA non-coding downstream 22867 20662698 ~ 20662981 (+)
G1525223 NA non-coding downstream 30798 20670629 ~ 20670878 (+)
G1525254 NA non-coding downstream 52276 20692107 ~ 20692326 (+)
G1524181 LOC106574559 other upstream 155836 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 332645 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 404369 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 563237 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 605904 19992559 ~ 20049054 (+)
G1525320 NA other downstream 116860 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 1959582 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2519002 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3880904 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4364930 25004761 ~ 25005609 (+)

Expression


Co-expression Network