G1525182


Basic Information

Item Value
gene id G1525182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20642503 ~ 20642820 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746344
CTTAAATAAACAAATATCAGCAGTTTTTATCGACAACACTGTGATACCAGTATTGCATTACATTTGAATGCCCTTGGGAATCCTCAGTTTAGAAAAGCACCATGGCTAACACATAACACAACCCCACAGGGACCCCAGCCACGGGCTGTTCACTCCCTTACCATCGGGCAGACGCtatcggagcatgaggtctgataccaacaggctcagagacagtttctatctacaagccgtCAGACTGCTGAAAACTTGAACTGGACTggccacctgctctgattctccacatcttagcacacacacactcacacacacacacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746344 True 318 lncRNA 0.47 1 20642503 20642820

Neighbor

gene id symbol gene type direction distance location
LOC110495795 LOC106574563 coding upstream 28374 20604886 ~ 20614129 (+)
LOC110495794 LOC106574560 coding upstream 90386 20527679 ~ 20552117 (+)
LOC110495791 LOC106575306 coding upstream 313893 20312098 ~ 20328610 (+)
LOC110495788 LOC106574550 coding upstream 340403 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 396615 20244354 ~ 20245888 (+)
LOC110495797 LOC106574564 coding downstream 20591 20663411 ~ 20696331 (+)
LOC110495798 LOC106575297 coding downstream 143249 20786069 ~ 20855643 (+)
LOC110497094 LOC106575296 coding downstream 229680 20872500 ~ 20885233 (+)
gcg1 gcg1 coding downstream 244631 20887451 ~ 20890292 (+)
LOC118941068 adcy10 coding downstream 247889 20890709 ~ 20900107 (+)
G1525178 NA non-coding upstream 2672 20639549 ~ 20639831 (+)
G1524276 NA non-coding upstream 27674 20614215 ~ 20614829 (+)
G1524272 LOC106579309 non-coding upstream 41655 20600137 ~ 20600848 (+)
G1524242 LOC106574562 non-coding upstream 80382 20561493 ~ 20562121 (+)
G1524241 LOC106574562 non-coding upstream 81647 20557879 ~ 20560856 (+)
G1525190 NA non-coding downstream 4250 20647070 ~ 20647390 (+)
G1525211 NA non-coding downstream 19878 20662698 ~ 20662981 (+)
G1525223 NA non-coding downstream 27809 20670629 ~ 20670878 (+)
G1525254 NA non-coding downstream 49287 20692107 ~ 20692326 (+)
G1524181 LOC106574559 other upstream 158790 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 335599 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 407323 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 566191 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 608858 19992559 ~ 20049054 (+)
G1525320 NA other downstream 113871 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 1956593 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2516013 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3877915 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4361941 25004761 ~ 25005609 (+)

Expression


Co-expression Network