G1525223


Basic Information

Item Value
gene id G1525223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20670629 ~ 20670878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746385
ataaatacatgtaatatattttgaattcaggctgttacacaacggaatgtggaataagtcaagaggtatgactactttctgaaggcacagtactTTAGGTATCACCATATACCCAGTAATACGGGGAGGGATGTCTTTTTTGTATGTGCGGATGTTTTCATTATGGGGACGATAGTCAGCACTTTGTATTCATTTATTATTTTGAGTATGCTATTTTGAGTGGGCCCCATTATTGTCAAAtctattatat

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746385 True 250 lncRNA 0.35 1 20670629 20670878

Neighbor

gene id symbol gene type direction distance location
LOC110495795 LOC106574563 coding upstream 56500 20604886 ~ 20614129 (+)
LOC110495794 LOC106574560 coding upstream 118512 20527679 ~ 20552117 (+)
LOC110495791 LOC106575306 coding upstream 342019 20312098 ~ 20328610 (+)
LOC110495788 LOC106574550 coding upstream 368529 20296017 ~ 20302100 (+)
LOC110497092 NA coding upstream 424741 20244354 ~ 20245888 (+)
LOC110495798 LOC106575297 coding downstream 115191 20786069 ~ 20855643 (+)
LOC110497094 LOC106575296 coding downstream 201622 20872500 ~ 20885233 (+)
gcg1 gcg1 coding downstream 216573 20887451 ~ 20890292 (+)
LOC118941068 adcy10 coding downstream 219831 20890709 ~ 20900107 (+)
LOC110495810 gemin8 coding downstream 298402 20969280 ~ 20979259 (+)
G1525211 NA non-coding upstream 7648 20662698 ~ 20662981 (+)
G1525190 NA non-coding upstream 23239 20647070 ~ 20647390 (+)
G1525182 NA non-coding upstream 27809 20642503 ~ 20642820 (+)
G1525178 NA non-coding upstream 30798 20639549 ~ 20639831 (+)
G1524276 NA non-coding upstream 55800 20614215 ~ 20614829 (+)
G1525254 NA non-coding downstream 21229 20692107 ~ 20692326 (+)
LOC110495797 LOC106574564 non-coding downstream 22686 20663411 ~ 20696331 (+)
G1525275 NA non-coding downstream 41282 20712160 ~ 20712367 (+)
G1525285 NA non-coding downstream 48492 20719370 ~ 20719686 (+)
G1525291 NA non-coding downstream 54109 20724987 ~ 20725206 (+)
G1524181 LOC106574559 other upstream 186916 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 363725 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 435449 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 594317 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 other upstream 636984 19992559 ~ 20049054 (+)
G1525320 NA other downstream 85813 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 1928535 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2487955 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3849857 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4333883 25004761 ~ 25005609 (+)

Expression


Co-expression Network