Gene
RNA
| Item | Value |
|---|---|
| gene id | G1525374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20846242 ~ 20846619 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1746541 | True | 378 | lncRNA | 0.48 | 1 | 20846242 | 20846619 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495797 | LOC106574564 | coding | upstream | 149911 | 20663411 ~ 20696331 (+) |
| LOC110495795 | LOC106574563 | coding | upstream | 232113 | 20604886 ~ 20614129 (+) |
| LOC110495794 | LOC106574560 | coding | upstream | 294125 | 20527679 ~ 20552117 (+) |
| LOC110495791 | LOC106575306 | coding | upstream | 517632 | 20312098 ~ 20328610 (+) |
| LOC110495788 | LOC106574550 | coding | upstream | 544142 | 20296017 ~ 20302100 (+) |
| LOC110497094 | LOC106575296 | coding | downstream | 25881 | 20872500 ~ 20885233 (+) |
| gcg1 | gcg1 | coding | downstream | 40832 | 20887451 ~ 20890292 (+) |
| LOC118941068 | adcy10 | coding | downstream | 44090 | 20890709 ~ 20900107 (+) |
| LOC110495810 | gemin8 | coding | downstream | 122661 | 20969280 ~ 20979259 (+) |
| LOC110495811 | LOC106574403 | coding | downstream | 133430 | 20980049 ~ 21013013 (+) |
| G1525371 | NA | non-coding | upstream | 4775 | 20839597 ~ 20841467 (+) |
| G1525317 | NA | non-coding | upstream | 94032 | 20751981 ~ 20752210 (+) |
| G1525299 | NA | non-coding | upstream | 111224 | 20734379 ~ 20735018 (+) |
| G1525291 | NA | non-coding | upstream | 121036 | 20724987 ~ 20725206 (+) |
| G1525285 | NA | non-coding | upstream | 126556 | 20719370 ~ 20719686 (+) |
| G1525377 | NA | non-coding | downstream | 19282 | 20865901 ~ 20866260 (+) |
| G1525384 | NA | non-coding | downstream | 40109 | 20886728 ~ 20886941 (+) |
| G1525392 | NA | non-coding | downstream | 50299 | 20896918 ~ 20897122 (+) |
| G1525436 | psde | non-coding | downstream | 109258 | 20955877 ~ 20957111 (+) |
| G1525320 | NA | other | upstream | 88830 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 362529 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 539338 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 611062 | 20206484 ~ 20236753 (+) |
| LOC110495776 | LOC106574545 | other | upstream | 769930 | 20065965 ~ 20110618 (+) |
| LOC110497098 | LOC106574424 | other | downstream | 1752794 | 22599016 ~ 22641368 (+) |
| G1528194 | NA | other | downstream | 2312214 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 3674116 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 4158142 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 4302364 | 25133210 ~ 25157338 (+) |
