G1525384


Basic Information

Item Value
gene id G1525384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20886728 ~ 20886941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746553
tcctacaatgtagaaaattgtaaaaataaagaaaaacccttgaacgagtaggtgtgtccaaacgagACTGGTACTATATAATCAAAATCAAAATGACTTTGGTTTGACATAATAATTGGATATCATCTGTAAATGGTTTATAAGTACATTCAGTAAACGGTAATGCAGGTATAGGCTTTGAAAAACACATGAATTCATGTTATCTAAAAGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746553 True 214 lncRNA 0.31 1 20886728 20886941

Neighbor

gene id symbol gene type direction distance location
LOC110497094 LOC106575296 coding upstream 1495 20872500 ~ 20885233 (+)
LOC110495798 LOC106575297 coding upstream 31085 20786069 ~ 20855643 (+)
LOC110495797 LOC106574564 coding upstream 190397 20663411 ~ 20696331 (+)
LOC110495795 LOC106574563 coding upstream 272599 20604886 ~ 20614129 (+)
LOC110495794 LOC106574560 coding upstream 334611 20527679 ~ 20552117 (+)
gcg1 gcg1 coding downstream 510 20887451 ~ 20890292 (+)
LOC118941068 adcy10 coding downstream 3768 20890709 ~ 20900107 (+)
LOC110495810 gemin8 coding downstream 82339 20969280 ~ 20979259 (+)
LOC110495811 LOC106574403 coding downstream 93108 20980049 ~ 21013013 (+)
LOC110495817 LOC106574411 coding downstream 289684 21176625 ~ 21257700 (+)
G1525377 NA non-coding upstream 20468 20865901 ~ 20866260 (+)
G1525374 NA non-coding upstream 40109 20846242 ~ 20846619 (+)
G1525371 NA non-coding upstream 45261 20839597 ~ 20841467 (+)
G1525317 NA non-coding upstream 134518 20751981 ~ 20752210 (+)
G1525299 NA non-coding upstream 151710 20734379 ~ 20735018 (+)
G1525392 NA non-coding downstream 9977 20896918 ~ 20897122 (+)
G1525436 psde non-coding downstream 68936 20955877 ~ 20957111 (+)
G1525406 NA non-coding downstream 134828 21021769 ~ 21022152 (+)
G1525460 NA non-coding downstream 138962 21025903 ~ 21026132 (+)
G1525320 NA other upstream 129316 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 403015 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 579824 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 651548 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 810416 20065965 ~ 20110618 (+)
LOC110497098 LOC106574424 other downstream 1712472 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2271892 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3633794 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4117820 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 4262042 25133210 ~ 25157338 (+)

Expression


Co-expression Network