G1525392


Basic Information

Item Value
gene id G1525392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20896918 ~ 20897122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746563
tttttttcgattgctaaacaacagtgggcacaactggagtcacatgtgcaaaactctaactacagtctgcactaccaacagtcacctgagctaaacagttcacatcacctgcaaaactcattccaagcaacacaactcttaacacatggctcaaaacacgctcagtgcagccaaacactatgcacaaccctcactgagataacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746563 True 205 lncRNA 0.44 1 20896918 20897122

Neighbor

gene id symbol gene type direction distance location
gcg1 gcg1 coding upstream 6626 20887451 ~ 20890292 (+)
LOC110497094 LOC106575296 coding upstream 11685 20872500 ~ 20885233 (+)
LOC110495798 LOC106575297 coding upstream 41275 20786069 ~ 20855643 (+)
LOC110495797 LOC106574564 coding upstream 200587 20663411 ~ 20696331 (+)
LOC110495795 LOC106574563 coding upstream 282789 20604886 ~ 20614129 (+)
LOC110495810 gemin8 coding downstream 72158 20969280 ~ 20979259 (+)
LOC110495811 LOC106574403 coding downstream 82927 20980049 ~ 21013013 (+)
LOC110495817 LOC106574411 coding downstream 279503 21176625 ~ 21257700 (+)
LOC110495818 LOC106574413 coding downstream 400074 21297196 ~ 21333742 (+)
LOC110495820 LOC106574417 coding downstream 1029531 21926653 ~ 21939273 (+)
G1525384 NA non-coding upstream 9977 20886728 ~ 20886941 (+)
G1525377 NA non-coding upstream 30658 20865901 ~ 20866260 (+)
G1525374 NA non-coding upstream 50299 20846242 ~ 20846619 (+)
G1525371 NA non-coding upstream 55451 20839597 ~ 20841467 (+)
G1525317 NA non-coding upstream 144708 20751981 ~ 20752210 (+)
G1525436 psde non-coding downstream 58755 20955877 ~ 20957111 (+)
G1525406 NA non-coding downstream 124647 21021769 ~ 21022152 (+)
G1525460 NA non-coding downstream 128781 21025903 ~ 21026132 (+)
G1525462 NA non-coding downstream 130847 21027969 ~ 21028343 (+)
G1525463 NA non-coding downstream 132527 21029649 ~ 21029900 (+)
G1525320 NA other upstream 139506 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 413205 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 590014 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 661738 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 820606 20065965 ~ 20110618 (+)
LOC110497098 LOC106574424 other downstream 1702291 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2261711 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3623613 24520697 ~ 24525649 (+)
G1530367 NA other downstream 4107639 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 4251861 25133210 ~ 25157338 (+)

Expression


Co-expression Network