Gene
RNA
| Item | Value |
|---|---|
| gene id | G1525436 |
| gene name | psde |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20955877 ~ 20957111 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 26S proteasome non-ATPase regulatory subunit 14 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1746627 | True | 524 | lncRNA | 0.48 | 3 | 20955877 | 20957111 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941068 | adcy10 | coding | upstream | 55770 | 20890709 ~ 20900107 (+) |
| gcg1 | gcg1 | coding | upstream | 65585 | 20887451 ~ 20890292 (+) |
| LOC110497094 | LOC106575296 | coding | upstream | 70644 | 20872500 ~ 20885233 (+) |
| LOC110495798 | LOC106575297 | coding | upstream | 100234 | 20786069 ~ 20855643 (+) |
| LOC110495797 | LOC106574564 | coding | upstream | 259546 | 20663411 ~ 20696331 (+) |
| LOC110495810 | gemin8 | coding | downstream | 12169 | 20969280 ~ 20979259 (+) |
| LOC110495811 | LOC106574403 | coding | downstream | 22938 | 20980049 ~ 21013013 (+) |
| LOC110495817 | LOC106574411 | coding | downstream | 219514 | 21176625 ~ 21257700 (+) |
| LOC110495818 | LOC106574413 | coding | downstream | 340085 | 21297196 ~ 21333742 (+) |
| LOC110495820 | LOC106574417 | coding | downstream | 969542 | 21926653 ~ 21939273 (+) |
| G1525392 | NA | non-coding | upstream | 58755 | 20896918 ~ 20897122 (+) |
| G1525384 | NA | non-coding | upstream | 68936 | 20886728 ~ 20886941 (+) |
| G1525377 | NA | non-coding | upstream | 89617 | 20865901 ~ 20866260 (+) |
| G1525374 | NA | non-coding | upstream | 109258 | 20846242 ~ 20846619 (+) |
| G1525406 | NA | non-coding | downstream | 64658 | 21021769 ~ 21022152 (+) |
| G1525460 | NA | non-coding | downstream | 68792 | 21025903 ~ 21026132 (+) |
| G1525462 | NA | non-coding | downstream | 70858 | 21027969 ~ 21028343 (+) |
| G1525463 | NA | non-coding | downstream | 72538 | 21029649 ~ 21029900 (+) |
| G1525464 | NA | non-coding | downstream | 72928 | 21030039 ~ 21030542 (+) |
| G1525320 | NA | other | upstream | 198465 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 472164 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 648973 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 720697 | 20206484 ~ 20236753 (+) |
| LOC110495776 | LOC106574545 | other | upstream | 879565 | 20065965 ~ 20110618 (+) |
| LOC110497098 | LOC106574424 | other | downstream | 1642302 | 22599016 ~ 22641368 (+) |
| G1528194 | NA | other | downstream | 2201722 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 3563624 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 4047650 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 4191872 | 25133210 ~ 25157338 (+) |
