G1525406


Basic Information

Item Value
gene id G1525406
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 21021769 ~ 21022152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1746588
GGCTAATTGGtaaaaacatatatatatatatatatagttaacaTTAAATGTGAAAGTCTAAAATATCTAACAACGAATAGTATCACTTGGTTACAACTGTACCTTGCTGTTTAAAATGTACTTCGGCGGTGCCATCCCTTTGCAAAATCCTCACAAGCGGCCGAGGTTTCCCGGTGACATGGCGCTACTGACGCTCATATGACCGATCGTTTGTCACGCCTACTGTGGGCAAAATGGATAAAGGATGCTATtaatgtgtgtgtaattgtgCTTTTACTACTGAAAAAGTATATGAAAGTATAGCAGGAAATTGACATTCTAAACACTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1746588 True 331 lncRNA 0.37 2 21021769 21022152

Neighbor

gene id symbol gene type direction distance location
LOC110495811 LOC106574403 coding upstream 8756 20980049 ~ 21013013 (+)
LOC110495810 gemin8 coding upstream 42510 20969280 ~ 20979259 (+)
LOC118941068 adcy10 coding upstream 121662 20890709 ~ 20900107 (+)
gcg1 gcg1 coding upstream 131477 20887451 ~ 20890292 (+)
LOC110497094 LOC106575296 coding upstream 136536 20872500 ~ 20885233 (+)
LOC110495817 LOC106574411 coding downstream 154473 21176625 ~ 21257700 (+)
LOC110495818 LOC106574413 coding downstream 275044 21297196 ~ 21333742 (+)
LOC110495820 LOC106574417 coding downstream 904501 21926653 ~ 21939273 (+)
LOC110495821 LOC106575277 coding downstream 1097625 22119777 ~ 22125450 (+)
LOC110495822 LOC106575275 coding downstream 1453622 22475774 ~ 22477639 (+)
G1525436 psde non-coding upstream 64658 20955877 ~ 20957111 (+)
G1525392 NA non-coding upstream 124647 20896918 ~ 20897122 (+)
G1525384 NA non-coding upstream 134828 20886728 ~ 20886941 (+)
G1525377 NA non-coding upstream 155509 20865901 ~ 20866260 (+)
G1525460 NA non-coding downstream 3751 21025903 ~ 21026132 (+)
G1525462 NA non-coding downstream 5817 21027969 ~ 21028343 (+)
G1525463 NA non-coding downstream 7497 21029649 ~ 21029900 (+)
G1525464 NA non-coding downstream 7887 21030039 ~ 21030542 (+)
G1525466 NA non-coding downstream 13406 21035558 ~ 21035803 (+)
G1525320 NA other upstream 264357 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 538056 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 714865 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 786589 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 945457 20065965 ~ 20110618 (+)
LOC110497098 LOC106574424 other downstream 1577261 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2136681 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3498583 24520697 ~ 24525649 (+)
G1530367 NA other downstream 3982609 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 4126831 25133210 ~ 25157338 (+)

Expression


Co-expression Network