G1525791


Basic Information

Item Value
gene id G1525791
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 21244826 ~ 21245657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1747011
TTGAATTTCCGTTAATCCCTTCTCTTTCTGTCGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCCGTAGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCTGTAGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCTGTAGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCTGTAGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCCGTAGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCTGTAGTGTGAATTGAATTTCTGTTAATCCCTTCTCTTTCCGTAGTGTGAATTGAATTTCCGTTAATCCCTTCTCTTTCTGTAGTGTGAATTGAATTTCTGTTAATCCCTTCTCTTTCCGTAGTGTGAATTTAATTTCCGTTAATCCCTTCTCTTTCTGTCGTGTGAATTGAATTTCCATGAATACCTTCTCTTTCCATTGTGTGAATTGAATTTCCGTTAAAACATTATTtgtgatgtttttttctctcactatTATAGCTCACGTTAAGAATGTTTCTATTTTCTCTTGTGGGCCTGTCAATGTCTCAAAGGAAGTATGGTGTAGTCGAATGCGTGGATACGTGTGCAAAAACACCTGCGTCCAAATATTCAATGAGTAATCACAGAACAATCCAAACAGTAACGATCGTAATCTAAAGATCTCGATCGTTCACgcacaaacacattcacacagagGGCGGCACACATCTTTCATCCATACacgaccaaac

Function

NR:

description
PREDICTED: mucin-2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1747011 True 754 lncRNA 0.37 2 21244826 21245657

Neighbor

gene id symbol gene type direction distance location
LOC110495811 LOC106574403 coding upstream 231813 20980049 ~ 21013013 (+)
LOC110495810 gemin8 coding upstream 265567 20969280 ~ 20979259 (+)
LOC118941068 adcy10 coding upstream 344719 20890709 ~ 20900107 (+)
gcg1 gcg1 coding upstream 354534 20887451 ~ 20890292 (+)
LOC110497094 LOC106575296 coding upstream 359593 20872500 ~ 20885233 (+)
LOC110495818 LOC106574413 coding downstream 51539 21297196 ~ 21333742 (+)
LOC110495820 LOC106574417 coding downstream 680996 21926653 ~ 21939273 (+)
LOC110495821 LOC106575277 coding downstream 874120 22119777 ~ 22125450 (+)
LOC110495822 LOC106575275 coding downstream 1230117 22475774 ~ 22477639 (+)
LOC110495826 LOC106575273 coding downstream 1321011 22566668 ~ 22596390 (+)
G1525722 NA non-coding upstream 89395 21155013 ~ 21155431 (+)
G1525502 LOC106574409 non-coding upstream 150562 21093863 ~ 21094264 (+)
G1525500 NA non-coding upstream 154609 21089316 ~ 21090217 (+)
G1525499 NA non-coding upstream 155690 21088918 ~ 21089136 (+)
G1525470 NA non-coding upstream 171558 21070867 ~ 21073268 (+)
LOC110495817 LOC106574411 non-coding downstream 10111 21176625 ~ 21257700 (+)
G1525979 NA non-coding downstream 111561 21357218 ~ 21357419 (+)
G1526018 NA non-coding downstream 134956 21380613 ~ 21381054 (+)
G1526049 NA non-coding downstream 156641 21402298 ~ 21402669 (+)
G1526170 NA non-coding downstream 278475 21524132 ~ 21525982 (+)
G1525320 NA other upstream 487414 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 761113 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 937922 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 1009646 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 1168514 20065965 ~ 20110618 (+)
LOC110497098 LOC106574424 other downstream 1353756 22599016 ~ 22641368 (+)
G1528194 NA other downstream 1913176 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3275078 24520697 ~ 24525649 (+)
G1530367 NA other downstream 3759104 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 3903326 25133210 ~ 25157338 (+)

Expression


Co-expression Network