Gene
RNA
| Item | Value |
|---|---|
| gene id | G1525979 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 21357218 ~ 21357419 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1747208 | True | 202 | lncRNA | 0.54 | 1 | 21357218 | 21357419 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495818 | LOC106574413 | coding | upstream | 23476 | 21297196 ~ 21333742 (+) |
| LOC110495817 | LOC106574411 | coding | upstream | 99518 | 21176625 ~ 21257700 (+) |
| LOC110495811 | LOC106574403 | coding | upstream | 344205 | 20980049 ~ 21013013 (+) |
| LOC110495810 | gemin8 | coding | upstream | 377959 | 20969280 ~ 20979259 (+) |
| LOC118941068 | adcy10 | coding | upstream | 457111 | 20890709 ~ 20900107 (+) |
| LOC110495820 | LOC106574417 | coding | downstream | 569234 | 21926653 ~ 21939273 (+) |
| LOC110495821 | LOC106575277 | coding | downstream | 762358 | 22119777 ~ 22125450 (+) |
| LOC110495822 | LOC106575275 | coding | downstream | 1118355 | 22475774 ~ 22477639 (+) |
| LOC110495826 | LOC106575273 | coding | downstream | 1209249 | 22566668 ~ 22596390 (+) |
| LOC110497098 | LOC106574424 | coding | downstream | 1241597 | 22599016 ~ 22641368 (+) |
| G1525791 | NA | non-coding | upstream | 111561 | 21244826 ~ 21245657 (+) |
| G1525722 | NA | non-coding | upstream | 201787 | 21155013 ~ 21155431 (+) |
| G1525502 | LOC106574409 | non-coding | upstream | 262954 | 21093863 ~ 21094264 (+) |
| G1525500 | NA | non-coding | upstream | 267001 | 21089316 ~ 21090217 (+) |
| G1526018 | NA | non-coding | downstream | 23194 | 21380613 ~ 21381054 (+) |
| G1526049 | NA | non-coding | downstream | 44879 | 21402298 ~ 21402669 (+) |
| G1526170 | NA | non-coding | downstream | 166713 | 21524132 ~ 21525982 (+) |
| G1526294 | NA | non-coding | downstream | 257046 | 21614465 ~ 21617563 (+) |
| G1526295 | NA | non-coding | downstream | 259186 | 21616605 ~ 21616920 (+) |
| G1525320 | NA | other | upstream | 599806 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 873505 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 1050314 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 1122038 | 20206484 ~ 20236753 (+) |
| LOC110495776 | LOC106574545 | other | upstream | 1280906 | 20065965 ~ 20110618 (+) |
| G1528194 | NA | other | downstream | 1801414 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 3163316 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 3647342 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 3791564 | 25133210 ~ 25157338 (+) |
