G1526049


Basic Information

Item Value
gene id G1526049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 21402298 ~ 21402669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1747279
gggtttacgcccaggctctgtcgcagccggccacgactgGGAGGTCTGTGAGGCGAAGCACAATTGGCCTTGCGGCGTCCGGATtagagagggtttggccggtagggatatccttgtctcattgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggtcgcacagtgtttcctccgacacattggtgcagctggcttccgggttagatGCGCGCtgggttaagaagcagtgcggcttggttgggttgtgtttcggaggacgcatgactttcaaccttcgtctctcccgagcctgtgcgggagttgtagcgatgagacaagatagtaactactaataatttTGGAAactacaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1747279 True 372 lncRNA 0.56 1 21402298 21402669

Neighbor

gene id symbol gene type direction distance location
LOC110495818 LOC106574413 coding upstream 68556 21297196 ~ 21333742 (+)
LOC110495817 LOC106574411 coding upstream 144598 21176625 ~ 21257700 (+)
LOC110495811 LOC106574403 coding upstream 389285 20980049 ~ 21013013 (+)
LOC110495810 gemin8 coding upstream 423039 20969280 ~ 20979259 (+)
LOC118941068 adcy10 coding upstream 502191 20890709 ~ 20900107 (+)
LOC110495820 LOC106574417 coding downstream 523984 21926653 ~ 21939273 (+)
LOC110495821 LOC106575277 coding downstream 717108 22119777 ~ 22125450 (+)
LOC110495822 LOC106575275 coding downstream 1073105 22475774 ~ 22477639 (+)
LOC110495826 LOC106575273 coding downstream 1163999 22566668 ~ 22596390 (+)
LOC110497098 LOC106574424 coding downstream 1196347 22599016 ~ 22641368 (+)
G1526018 NA non-coding upstream 21244 21380613 ~ 21381054 (+)
G1525979 NA non-coding upstream 44879 21357218 ~ 21357419 (+)
G1525791 NA non-coding upstream 156641 21244826 ~ 21245657 (+)
G1525722 NA non-coding upstream 246867 21155013 ~ 21155431 (+)
G1526170 NA non-coding downstream 121463 21524132 ~ 21525982 (+)
G1526294 NA non-coding downstream 211796 21614465 ~ 21617563 (+)
G1526295 NA non-coding downstream 213936 21616605 ~ 21616920 (+)
G1526299 NA non-coding downstream 219916 21622585 ~ 21622815 (+)
G1526304 NA non-coding downstream 224524 21627193 ~ 21627423 (+)
G1525320 NA other upstream 644886 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 918585 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 1095394 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 1167118 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 1325986 20065965 ~ 20110618 (+)
G1528194 NA other downstream 1756164 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 3118066 24520697 ~ 24525649 (+)
G1530367 NA other downstream 3602092 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 3746314 25133210 ~ 25157338 (+)

Expression


Co-expression Network