G1526294


Basic Information

Item Value
gene id G1526294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 21614465 ~ 21617563 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1747530
cactgtcacgccctgaccatagtttactttgtattttctatgttttgattggtcagggtgtgatctgagtgggcattctatgttacatgtctagtttgtctagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgttttcaccagataggctgtttaggtttccgttacgtttattgtttttgtagtgtttgtgtttagtgtgtttttcattaaacatgaatcgcaatcgacacgctgcattttggtccgactc
>TU1747531
cactgtcacgccctgaccatagtttactttgtattttctatgttttgattggtcagggtgtgatctgagtgggcattctatgttacatgtctagtttgtctagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgttttcaccagataggctgtttaggtttccgttacgtttattgtttttgtagtgtttgtgtttagtgtgtttttcattaaacatgaatcgcaatcgacacgctgcattttggtccgactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1747530 False 348 lncRNA 0.41 2 21614465 21617563
TU1747531 True 348 lncRNA 0.41 2 21614465 21617563

Neighbor

gene id symbol gene type direction distance location
LOC110495818 LOC106574413 coding upstream 280723 21297196 ~ 21333742 (+)
LOC110495817 LOC106574411 coding upstream 356765 21176625 ~ 21257700 (+)
LOC110495811 LOC106574403 coding upstream 601452 20980049 ~ 21013013 (+)
LOC110495810 gemin8 coding upstream 635206 20969280 ~ 20979259 (+)
LOC118941068 adcy10 coding upstream 714358 20890709 ~ 20900107 (+)
LOC110495820 LOC106574417 coding downstream 309090 21926653 ~ 21939273 (+)
LOC110495821 LOC106575277 coding downstream 502214 22119777 ~ 22125450 (+)
LOC110495822 LOC106575275 coding downstream 858211 22475774 ~ 22477639 (+)
LOC110495826 LOC106575273 coding downstream 949105 22566668 ~ 22596390 (+)
LOC110497098 LOC106574424 coding downstream 981453 22599016 ~ 22641368 (+)
G1526170 NA non-coding upstream 88483 21524132 ~ 21525982 (+)
G1526049 NA non-coding upstream 211796 21402298 ~ 21402669 (+)
G1526018 NA non-coding upstream 233411 21380613 ~ 21381054 (+)
G1525979 NA non-coding upstream 257046 21357218 ~ 21357419 (+)
G1526299 NA non-coding downstream 5022 21622585 ~ 21622815 (+)
G1526304 NA non-coding downstream 9630 21627193 ~ 21627423 (+)
G1526520 NA non-coding downstream 122890 21740453 ~ 21740837 (+)
G1526532 NA non-coding downstream 133886 21751449 ~ 21751709 (+)
G1526601 NA non-coding downstream 178161 21795724 ~ 21796188 (+)
G1525320 NA other upstream 857053 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 1130752 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 1307561 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 1379285 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 1538153 20065965 ~ 20110618 (+)
G1528194 NA other downstream 1541270 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 2903172 24520697 ~ 24525649 (+)
G1530367 NA other downstream 3387198 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 3531420 25133210 ~ 25157338 (+)

Expression


Co-expression Network