Gene
RNA
| Item | Value |
|---|---|
| gene id | G1527216 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 22253656 ~ 22253890 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1748538 | True | 235 | lncRNA | 0.39 | 1 | 22253656 | 22253890 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495821 | LOC106575277 | coding | upstream | 128206 | 22119777 ~ 22125450 (+) |
| LOC110495820 | LOC106574417 | coding | upstream | 314383 | 21926653 ~ 21939273 (+) |
| LOC110495818 | LOC106574413 | coding | upstream | 919914 | 21297196 ~ 21333742 (+) |
| LOC110495817 | LOC106574411 | coding | upstream | 995956 | 21176625 ~ 21257700 (+) |
| LOC110495811 | LOC106574403 | coding | upstream | 1240643 | 20980049 ~ 21013013 (+) |
| LOC110495822 | LOC106575275 | coding | downstream | 221884 | 22475774 ~ 22477639 (+) |
| LOC110495826 | LOC106575273 | coding | downstream | 312778 | 22566668 ~ 22596390 (+) |
| LOC110497098 | LOC106574424 | coding | downstream | 345126 | 22599016 ~ 22641368 (+) |
| LOC110495829 | LOC106574429 | coding | downstream | 446452 | 22700342 ~ 22713534 (+) |
| LOC110495834 | LOC106574432 | coding | downstream | 496798 | 22750688 ~ 22752806 (+) |
| G1526984 | NA | non-coding | upstream | 51005 | 22202387 ~ 22202651 (+) |
| G1526604 | NA | non-coding | upstream | 455103 | 21798266 ~ 21798553 (+) |
| G1526601 | NA | non-coding | upstream | 457468 | 21795724 ~ 21796188 (+) |
| G1526532 | NA | non-coding | upstream | 501947 | 21751449 ~ 21751709 (+) |
| G1526520 | NA | non-coding | upstream | 512819 | 21740453 ~ 21740837 (+) |
| G1527235 | NA | non-coding | downstream | 12906 | 22266796 ~ 22267021 (+) |
| G1527254 | NA | non-coding | downstream | 23417 | 22277307 ~ 22277524 (+) |
| G1527279 | NA | non-coding | downstream | 49879 | 22303769 ~ 22311636 (+) |
| G1527341 | NA | non-coding | downstream | 137517 | 22391407 ~ 22391806 (+) |
| G1527384 | NA | non-coding | downstream | 226811 | 22480701 ~ 22480916 (+) |
| G1525320 | NA | other | upstream | 1496244 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 1769943 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 1946752 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 2018476 | 20206484 ~ 20236753 (+) |
| LOC110495776 | LOC106574545 | other | upstream | 2177344 | 20065965 ~ 20110618 (+) |
| G1528194 | NA | other | downstream | 904943 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 2266845 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 2750871 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 2895093 | 25133210 ~ 25157338 (+) |
