G1527618


Basic Information

Item Value
gene id G1527618
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 22303769 ~ 22311636 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1749012
tgtgtaGCCGGTGCTATACTAcaccgctgtaactctgcgttgtgtgtggttgatagAGACCATAaacgtggactttggagatcaggtagttttaatcaagcagaactgactctctgcatcttgcatctgcatccaaaaggaaataaaacatttgtagagcacatctgttctgagaatcgtcgcctctttctctctcagtgcatcaaaatgattttcAATACAAAAATTAATACACTCTCTCCTTATTATacataacatattttacattgataaaaccacatacctgcatccaaaaggaaataaaacatttgtagagcacatctgttctgagaatcgtcgcctctttctacaacagatgcacaataggagggactgggatcattcgaggagctagccatcgttcacacatacaatagcctgctaataccttagctagctattaaccacatgttgaattcagaataTTGATATCGtcctaaaaagtacaattacaagtgcatcttaacaataccatccatttatgagtaacctctaaatatacatcattattcatgaacaaaacattgtgtgtatgactttgtacttaaaagaatcaaacttttctgaagacagaaaaagcgtgcctacctctctcagtgcatcaaaatgatttgagcacgagcacgccgggcaaaacgtaagtacacactccccttctcccaggatgcaggcatgcataacaaatcaacacaacatattgatatatgaacctggtgaaattcacatagTACTTCAACAACTGTTACATA

Function

NR:

description
zonadhesin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1749012 True 788 lncRNA 0.38 2 22303769 22311636

Neighbor

gene id symbol gene type direction distance location
LOC110495819 LOC106575280 coding downstream 491203 21806394 ~ 21812566 (-)
LOC118941122 LOC106610709 coding downstream 1076322 21222811 ~ 21227447 (-)
LOC110495815 LOC106574410 coding downstream 1129797 21164578 ~ 21173972 (-)
LOC110495814 LOC106574409 coding downstream 1196245 21089235 ~ 21107524 (-)
LOC110495813 prps2 coding downstream 1215747 21075185 ~ 21088022 (-)
LOC110495824 LOC106575275 coding upstream 152560 22464196 ~ 22477509 (-)
LOC110495825 LOC106574420 coding upstream 201585 22513221 ~ 22522015 (-)
LOC110495827 LOC106574421 coding upstream 226351 22537987 ~ 22590992 (-)
LOC110497099 NA coding upstream 369021 22680498 ~ 22690348 (-)
LOC110495828 cfap221 coding upstream 383666 22695302 ~ 22700120 (-)
G1527612 NA non-coding downstream 5462 22297968 ~ 22298307 (-)
G1527258 NA non-coding downstream 23741 22279782 ~ 22280028 (-)
G1527226 NA non-coding downstream 44688 22258881 ~ 22259081 (-)
G1527215 NA non-coding downstream 50624 22252890 ~ 22253145 (-)
G1527148 NA non-coding downstream 101118 22202214 ~ 22202651 (-)
G1527629 NA non-coding upstream 23676 22335312 ~ 22335551 (-)
G1527632 NA non-coding upstream 33461 22345097 ~ 22345441 (-)
G1527643 NA non-coding upstream 43784 22355420 ~ 22358448 (-)
G1527675 NA non-coding upstream 89108 22400744 ~ 22400980 (-)
G1527676 NA non-coding upstream 92958 22404594 ~ 22404798 (-)
G1527230 NA other downstream 41307 22262056 ~ 22262462 (-)
LOC110497093 LOC106574562 other downstream 1731902 20558557 ~ 20595753 (-)
G1524755 LOC106581475 other downstream 2573701 19722745 ~ 19730068 (-)
LOC110495764 LOC106574529 other downstream 2726669 19573628 ~ 19577133 (-)
G1524473 LOC106574589 other downstream 3139643 19143985 ~ 19164126 (-)
G1528018 NA other upstream 560409 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 847922 23008547 ~ 23168591 (-)
LOC110495851 LOC106574449 other upstream 1169904 23479558 ~ 23541681 (-)
LOC110495852 LOC106574460 other upstream 1230970 23542411 ~ 23543631 (-)
LOC110497104 LOC106574262 other upstream 1968102 24279738 ~ 24371432 (-)

Expression


Co-expression Network