Gene
RNA
| Item | Value |
|---|---|
| gene id | G1527970 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 22871552 ~ 22885161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1749395 | True | 238 | lncRNA | 0.37 | 2 | 22871552 | 22885161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495835 | en1 | coding | upstream | 97878 | 22769391 ~ 22773674 (+) |
| LOC110495834 | LOC106574432 | coding | upstream | 118746 | 22750688 ~ 22752806 (+) |
| LOC110495829 | LOC106574429 | coding | upstream | 158018 | 22700342 ~ 22713534 (+) |
| LOC110497098 | LOC106574424 | coding | upstream | 230184 | 22599016 ~ 22641368 (+) |
| LOC110495826 | LOC106575273 | coding | upstream | 275162 | 22566668 ~ 22596390 (+) |
| LOC110495843 | LOC106574436 | coding | downstream | 300263 | 23185424 ~ 23198238 (+) |
| LOC110495847 | LOC106574438 | coding | downstream | 383714 | 23268875 ~ 23273932 (+) |
| LOC110495849 | LOC106574443 | coding | downstream | 433582 | 23318743 ~ 23342541 (+) |
| LOC110495853 | LOC106574225 | coding | downstream | 668689 | 23553850 ~ 23564696 (+) |
| LOC110495857 | LOC106575156 | coding | downstream | 680426 | 23565587 ~ 23570089 (+) |
| G1527420 | NA | non-coding | upstream | 261805 | 22546056 ~ 22609747 (+) |
| G1527403 | NA | non-coding | upstream | 370145 | 22501145 ~ 22501407 (+) |
| G1527398 | NA | non-coding | upstream | 374170 | 22497172 ~ 22497382 (+) |
| G1527395 | NA | non-coding | upstream | 376898 | 22494430 ~ 22494654 (+) |
| G1527384 | NA | non-coding | upstream | 390636 | 22480701 ~ 22480916 (+) |
| G1527985 | NA | non-coding | downstream | 16582 | 22901743 ~ 22902638 (+) |
| G1528057 | NA | non-coding | downstream | 70216 | 22955377 ~ 22955666 (+) |
| G1528059 | NA | non-coding | downstream | 70591 | 22955752 ~ 22962753 (+) |
| G1528078 | NA | non-coding | downstream | 109994 | 22995155 ~ 22995440 (+) |
| G1528079 | NA | non-coding | downstream | 110758 | 22995919 ~ 22997587 (+) |
| G1525320 | NA | other | upstream | 2114140 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 2387839 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 2564648 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 2636372 | 20206484 ~ 20236753 (+) |
| G1528194 | NA | other | downstream | 273672 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 1635574 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 2119600 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 2263822 | 25133210 ~ 25157338 (+) |
| G1530785 | NA | other | downstream | 2681310 | 25566471 ~ 25571346 (+) |
