G1528059


Basic Information

Item Value
gene id G1528059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 22955752 ~ 22962753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1749494
TTCATATTCACTGCATTGTTCATTCACCTTGGTTTGAAAGTACTGTAGCGAAAGCAGCTTCTAGACTTAATACACTTACTGTACCGTTAAAAATAGTCCTTTCAGGTTATAACCATCGAGACACATTTATAGAAATATCTGTCTGCCTTTATTGGAATGTGGGTGGGCGTTGAAATCCACAGATTTGGTACATGGTCAAATACACGAGACCCTCGACAGCAATGATGGTCTAACCGTCATTTCAATTGAACTGATAAATGTAAAGATATTGTAAATGTAAAGATACTTTGTAAAGATATTGTATGATTCAGGGATTCATGGATCATTCCAACCCAATCCACGAAGCAAccacacaacaaaacaaaaaaactgtgGATGGTAAGACTGTATTAGTTTGAGAGAATAAATCTCTGTCAATATTACATGGGTAGTTATGGGTTCTggcccccaaaaaaatatttatacacacacacacacacacacgtagaaatgtccttgttttttaaagaaaagcacattttttgtccattaaaatagcatcaaattgatcagaaatacagtgtagacatggttaatgttgtaaatgactagtgtagctggaaacggttgaTTTTGAAtggatatctacataggcatacagaggcccattatcagcaaccatcactcctgtgttccaatggcaagttgtgttagctaatccaagtttataattttaaaaaggataattgatcattagaaaacccttttgcaattatgttaacactgctgaaaactgttgttctgattaaagaaacaaCAAAACTGGCCAtctttcacagaacagcgcaaactggccctaaccagagaggagtgggaggccccggtgcacagctgagcaagaggacaagtacattagtgtctagtttgagaaacaaacaccagtctcaacgtcaacagtgaagaggcgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1749494 True 948 lncRNA 0.38 2 22955752 22962753

Neighbor

gene id symbol gene type direction distance location
LOC110495835 en1 coding upstream 182078 22769391 ~ 22773674 (+)
LOC110495834 LOC106574432 coding upstream 202946 22750688 ~ 22752806 (+)
LOC110495829 LOC106574429 coding upstream 242218 22700342 ~ 22713534 (+)
LOC110497098 LOC106574424 coding upstream 314384 22599016 ~ 22641368 (+)
LOC110495826 LOC106575273 coding upstream 359362 22566668 ~ 22596390 (+)
LOC110495843 LOC106574436 coding downstream 222671 23185424 ~ 23198238 (+)
LOC110495847 LOC106574438 coding downstream 306122 23268875 ~ 23273932 (+)
LOC110495849 LOC106574443 coding downstream 355990 23318743 ~ 23342541 (+)
LOC110495853 LOC106574225 coding downstream 591097 23553850 ~ 23564696 (+)
LOC110495857 LOC106575156 coding downstream 602834 23565587 ~ 23570089 (+)
G1528057 NA non-coding upstream 86 22955377 ~ 22955666 (+)
G1527985 NA non-coding upstream 53114 22901743 ~ 22902638 (+)
G1527970 NA non-coding upstream 70591 22871552 ~ 22885161 (+)
G1527420 NA non-coding upstream 346005 22546056 ~ 22609747 (+)
G1527403 NA non-coding upstream 454345 22501145 ~ 22501407 (+)
G1528078 NA non-coding downstream 32402 22995155 ~ 22995440 (+)
G1528079 NA non-coding downstream 33166 22995919 ~ 22997587 (+)
G1528110 NA non-coding downstream 78529 23041282 ~ 23041485 (+)
G1528117 NA non-coding downstream 85144 23047897 ~ 23048125 (+)
G1528124 NA non-coding downstream 97761 23060514 ~ 23060763 (+)
G1525320 NA other upstream 2198340 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 2472039 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 2648848 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 2720572 20206484 ~ 20236753 (+)
G1528194 NA other downstream 196080 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 1557982 24520697 ~ 24525649 (+)
G1530367 NA other downstream 2042008 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 2186230 25133210 ~ 25157338 (+)
G1530785 NA other downstream 2603718 25566471 ~ 25571346 (+)

Expression


Co-expression Network