Gene
RNA
| Item | Value |
|---|---|
| gene id | G1528110 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 23041282 ~ 23041485 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nck-associated protein 5-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1749546 | True | 204 | lncRNA | 0.57 | 1 | 23041282 | 23041485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495835 | en1 | coding | upstream | 267608 | 22769391 ~ 22773674 (+) |
| LOC110495834 | LOC106574432 | coding | upstream | 288476 | 22750688 ~ 22752806 (+) |
| LOC110495829 | LOC106574429 | coding | upstream | 327748 | 22700342 ~ 22713534 (+) |
| LOC110497098 | LOC106574424 | coding | upstream | 399914 | 22599016 ~ 22641368 (+) |
| LOC110495826 | LOC106575273 | coding | upstream | 444892 | 22566668 ~ 22596390 (+) |
| LOC110495843 | LOC106574436 | coding | downstream | 143939 | 23185424 ~ 23198238 (+) |
| LOC110495847 | LOC106574438 | coding | downstream | 227390 | 23268875 ~ 23273932 (+) |
| LOC110495849 | LOC106574443 | coding | downstream | 277258 | 23318743 ~ 23342541 (+) |
| LOC110495853 | LOC106574225 | coding | downstream | 512365 | 23553850 ~ 23564696 (+) |
| LOC110495857 | LOC106575156 | coding | downstream | 524102 | 23565587 ~ 23570089 (+) |
| G1528079 | NA | non-coding | upstream | 43695 | 22995919 ~ 22997587 (+) |
| G1528078 | NA | non-coding | upstream | 45842 | 22995155 ~ 22995440 (+) |
| G1528059 | NA | non-coding | upstream | 78529 | 22955752 ~ 22962753 (+) |
| G1528057 | NA | non-coding | upstream | 85616 | 22955377 ~ 22955666 (+) |
| G1527985 | NA | non-coding | upstream | 138644 | 22901743 ~ 22902638 (+) |
| G1528117 | NA | non-coding | downstream | 6412 | 23047897 ~ 23048125 (+) |
| G1528124 | NA | non-coding | downstream | 19029 | 23060514 ~ 23060763 (+) |
| G1528125 | NA | non-coding | downstream | 19504 | 23060989 ~ 23061226 (+) |
| G1528131 | NA | non-coding | downstream | 29000 | 23070485 ~ 23070718 (+) |
| G1528133 | NA | non-coding | downstream | 32324 | 23073809 ~ 23074114 (+) |
| G1525320 | NA | other | upstream | 2283870 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 2557569 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 2734378 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 2806102 | 20206484 ~ 20236753 (+) |
| G1528194 | NA | other | downstream | 117348 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 1479250 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 1963276 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 2107498 | 25133210 ~ 25157338 (+) |
| G1530785 | NA | other | downstream | 2524986 | 25566471 ~ 25571346 (+) |
